BLASTX nr result

ID: Scutellaria22_contig00027433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027433
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    67   1e-09
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    67   2e-09
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    67   2e-09
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    65   6e-09
ref|XP_004161031.1| PREDICTED: uncharacterized protein LOC101230...    65   7e-09

>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = +2

Query: 116 SWILDTGASRHMCSDRNIMHSIHTLTQPLSVYLPNGTSISVTHSGNVDINDQIVLTDVLY 295
           SWILD+GA+ H+    + +HS H    P++V LPNG  +  THSG V ++  I L DVLY
Sbjct: 742 SWILDSGATDHVTCSLHNLHS-HKRINPITVKLPNGQYVHATHSGTVQLSSNITLHDVLY 800

Query: 296 IPSFKY 313
           IPSF +
Sbjct: 801 IPSFTF 806


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/80 (36%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = +2

Query: 77  SYALNAVENVCG-ESWILDTGASRHMCSDRNIMHSIHTLTQPLSVYLPNGTSISVTHSGN 253
           ++ L++++NV   ++WI+D+GAS H+CSD  +   +  ++  ++V LPNGT +++TH+G 
Sbjct: 382 NHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFRELIHVSG-VTVTLPNGTRVAITHTGT 440

Query: 254 VDINDQIVLTDVLYIPSFKY 313
           + I   ++L +VL +P FK+
Sbjct: 441 ICITSTLILHNVLLVPDFKF 460


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/80 (36%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = +2

Query: 77  SYALNAVENVCG-ESWILDTGASRHMCSDRNIMHSIHTLTQPLSVYLPNGTSISVTHSGN 253
           ++ L++++NV   ++WI+D+GAS H+CSD  +   +  ++  ++V LPNGT +++TH+G 
Sbjct: 84  NHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFRELIHVSG-VTVTLPNGTRVAITHTGT 142

Query: 254 VDINDQIVLTDVLYIPSFKY 313
           + I   ++L +VL +P FK+
Sbjct: 143 ICITSTLILHNVLLVPDFKF 162


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/65 (43%), Positives = 46/65 (70%)
 Frame = +2

Query: 119 WILDTGASRHMCSDRNIMHSIHTLTQPLSVYLPNGTSISVTHSGNVDINDQIVLTDVLYI 298
           WILD+GA+ H+C++ ++ HSIH+ +   +V LP GT I +T  G + ++  +VL  VLYI
Sbjct: 374 WILDSGATHHVCTNSSMFHSIHSFSSN-TVTLPTGTKIPITGIGTIHLSPHLVLEHVLYI 432

Query: 299 PSFKY 313
           P+F++
Sbjct: 433 PTFQF 437


>ref|XP_004161031.1| PREDICTED: uncharacterized protein LOC101230271 [Cucumis sativus]
          Length = 457

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/66 (45%), Positives = 46/66 (69%)
 Frame = +2

Query: 116 SWILDTGASRHMCSDRNIMHSIHTLTQPLSVYLPNGTSISVTHSGNVDINDQIVLTDVLY 295
           +WI+D+GAS H+C D+ +  ++++  Q + V LP  T + V H G+V I++ +VL DVLY
Sbjct: 378 TWIIDSGASSHICHDKFMFTNLYS-AQNMFVILPTKTRLKVEHIGDVFISNDLVLKDVLY 436

Query: 296 IPSFKY 313
           IP FKY
Sbjct: 437 IPDFKY 442


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