BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027192
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   218   1e-54
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   208   1e-51
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   206   4e-51
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   204   2e-50
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   191   1e-46

>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 924

 Score =  218 bits (555), Expect = 1e-54
 Identities = 107/188 (56%), Positives = 134/188 (71%), Gaps = 1/188 (0%)
 Frame = -3

Query: 563 MDDPSILATPEAKIKEIRFGLATRQEICKASISDCPISHVTQLSNPFLGLPLETGKCESC 384
           MD+ S  +  + +I  IRFGLAT++EIC ASISDCPISH +QL+NPFLGLPLE GKCESC
Sbjct: 1   MDENSQSSIFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESC 60

Query: 383 GTGEAGQCEGHFGYIELPTPIYHPDHVAEXXXXXXXXXXXXXXXXXXKSQVKNITVAERM 204
           GT E G+CEGHFG+I LP PIYHP H++E                  K Q+K+  VAER+
Sbjct: 61  GTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERL 120

Query: 203 LSCCEEASQVSIHEARTTDGAYYLELKVPSRSNVH-GIWKFLEKYGFLYGYKYSRPLLAS 27
           LSCCEE +Q+SI E + TDGA +LELK+PSRS +  G W FLE+YGF YG  ++RPLL  
Sbjct: 121 LSCCEECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTRPLLPC 180

Query: 26  EVAAMLRK 3
           EV  +L++
Sbjct: 181 EVMQILKR 188


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  208 bits (529), Expect = 1e-51
 Identities = 103/178 (57%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
 Frame = -3

Query: 533 EAKIKEIRFGLATRQEICKASISDCPISHVTQLSNPFLGLPLETGKCESCGTGEAGQCEG 354
           E ++  I+FGLAT +EI  AS+SDCPISH +QL+NPFLGLPLE GKCESCGT E G+CEG
Sbjct: 13  EGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCESCGTSEPGKCEG 72

Query: 353 HFGYIELPTPIYHPDHVAEXXXXXXXXXXXXXXXXXXKSQVKNITVAERMLSCCEEASQV 174
           HFGYIELP PIYHP HV+E                   +++K+  VAER+ SCCEEA+Q+
Sbjct: 73  HFGYIELPIPIYHPSHVSE--LKRMLSLLCLKCLKLKTNKIKSSGVAERLFSCCEEAAQI 130

Query: 173 SIHEARTTDGAYYLELKVPSRSNVH-GIWKFLEKYGFLYGYKYSRPLLASEVAAMLRK 3
           SI E +TTDGAY L+LK+PSR  +  G W FLE+YGF YG   +R LL  EV  MLR+
Sbjct: 131 SIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLLPCEVLEMLRR 188


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  206 bits (524), Expect = 4e-51
 Identities = 106/186 (56%), Positives = 129/186 (69%), Gaps = 2/186 (1%)
 Frame = -3

Query: 554 PSILATPEAKIKEIRFGLATRQEICKASISDCPISHVTQLSNPFLGLPLETGKCESCGTG 375
           PS  +  +A+I  IRF LA  QEIC A+ISDCPI+H +QLSNPFLGLP+E GKCESCGT 
Sbjct: 5   PSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTS 64

Query: 374 EAGQCEGHFGYIELPTPIYHPDHVAEXXXXXXXXXXXXXXXXXXKSQVKNITVAERML-S 198
           E G+CEGHFGYIELP PIYHP+H+ E                    + KNI  AER+L S
Sbjct: 65  EPGKCEGHFGYIELPIPIYHPNHITE----LKKMLSLLCLKCLKMKKTKNIGFAERLLSS 120

Query: 197 CCEEASQVSIHEARTTDGAYYLELKVPSRSNV-HGIWKFLEKYGFLYGYKYSRPLLASEV 21
           CCE+ASQV+I EA+  DGA YL+LKVPSR+++    W FLE+YGF YG  ++R LL  EV
Sbjct: 121 CCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEV 180

Query: 20  AAMLRK 3
             ML+K
Sbjct: 181 KEMLKK 186


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  204 bits (518), Expect = 2e-50
 Identities = 104/179 (58%), Positives = 127/179 (70%), Gaps = 2/179 (1%)
 Frame = -3

Query: 533 EAKIKEIRFGLATRQEICKASISDCPISHVTQLSNPFLGLPLETGKCESCGTGEAGQCEG 354
           + +I  IRFGLATRQEIC AS+SDCPISH +QL+NPFLGLPLE GKCESCGT E GQCEG
Sbjct: 10  DGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEPGQCEG 69

Query: 353 HFGYIELPTPIYHPDHVAEXXXXXXXXXXXXXXXXXXKSQVKNITVAERMLS-CCEEASQ 177
           HFGYIELP PIYHP HV+E                  KS+V N  + E++L+ CC+++ Q
Sbjct: 70  HFGYIELPIPIYHPGHVSE--LKRMLSLLCLKCLKIRKSKVTNNGITEQLLAPCCQDSPQ 127

Query: 176 VSIHEARTTDGAYYLELKVPSRSN-VHGIWKFLEKYGFLYGYKYSRPLLASEVAAMLRK 3
           VS+ E R T+GA +LELK+PSRS    G W FL +YG+ YG+  SR LL SEV  +LR+
Sbjct: 128 VSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNLSRILLPSEVMEILRR 186


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  191 bits (486), Expect = 1e-46
 Identities = 106/212 (50%), Positives = 129/212 (60%), Gaps = 28/212 (13%)
 Frame = -3

Query: 554 PSILATPEAKIKEIRFGLATRQEICKASISDCPISHVTQLSNPFLGLPLETGKCESCGTG 375
           PS  +  +A+I  IRF LA  QEIC A+ISDCPI+H +QLSNPFLGLP+E GKCESCGT 
Sbjct: 5   PSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCESCGTS 64

Query: 374 EAGQCE--------------------------GHFGYIELPTPIYHPDHVAEXXXXXXXX 273
           E G+CE                          GHFGYIELP PIYHP+H+ E        
Sbjct: 65  EPGKCEGIDFFFXIFNVLHNTTXQVVFIFHLSGHFGYIELPIPIYHPNHITELKKMLSLL 124

Query: 272 XXXXXXXXXXKSQVKNITVAERML-SCCEEASQVSIHEARTTDGAYYLELKVPSRSNV-H 99
                     K   KNI  AER+L SCCE+ASQV+I EA+  DGA YL+LKVPSR+++  
Sbjct: 125 CLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQE 184

Query: 98  GIWKFLEKYGFLYGYKYSRPLLASEVAAMLRK 3
             W FLE+YGF YG  ++R LL+  V  ML+K
Sbjct: 185 RFWDFLERYGFRYGDNFTRTLLSVMVKEMLKK 216