BLASTX nr result

ID: Scutellaria22_contig00027146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00027146
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...   167   1e-39
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
emb|CBI25349.3| unnamed protein product [Vitis vinifera]              162   2e-38

>ref|XP_002319343.1| predicted protein [Populus trichocarpa] gi|222857719|gb|EEE95266.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score =  178 bits (452), Expect = 4e-43
 Identities = 85/135 (62%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402  PDGITFLNLISSCNHCGLIEEGLNLFHSMR-GNGIEPNMYHYVNIVDLLGRGGYLDDARE 226
            PD ITF++L++SCNHCG IEEGL LF  M   +GIEP M HYVNIVDLLGR G LDDA  
Sbjct: 658  PDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYA 717

Query: 225  FIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRGSNYVQLLNLYVEAGL 46
            F++ + I PDR +WLSLL + RVH NVE+G++AAH L+ ++P RGSNYVQLLNLY E  L
Sbjct: 718  FVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENEL 777

Query: 45   KEKASNLRAVMRDKG 1
            +++A+NLRA M++KG
Sbjct: 778  QDRAANLRASMKEKG 792


>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 833

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/135 (60%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402  PDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNMYHYVNIVDLLGRGGYLDDARE 226
            PD +TFL+L+SSCNH GLIEEGL+LF  M+   GIEP M HYVNIVDL GR G L DA  
Sbjct: 643  PDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYS 702

Query: 225  FIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRGSNYVQLLNLYVEAGL 46
            F++ M + PDR +WLSLL + ++H N+E+GEM A+ L+ M+P +GSNYVQLLNLY EA L
Sbjct: 703  FVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAEL 762

Query: 45   KEKASNLRAVMRDKG 1
             ++ +NLRA M++KG
Sbjct: 763  WDRTANLRASMKEKG 777


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/135 (57%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402  PDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNMYHYVNIVDLLGRGGYLDDARE 226
            PD +TFL+LIS+CNH G +EEG N+F  M+ + GIEPNM HY N+VDLLGR G L++A  
Sbjct: 676  PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYS 735

Query: 225  FIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRGSNYVQLLNLYVEAGL 46
            FI+ M I  D  +WL LLSASR H NVE+G ++A  L++M+P+RGS YVQL+NLY+EAGL
Sbjct: 736  FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGL 795

Query: 45   KEKASNLRAVMRDKG 1
            K +A+ L  +M++KG
Sbjct: 796  KNEAAKLLGLMKEKG 810


>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
            [Vitis vinifera]
          Length = 836

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/135 (59%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402  PDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNMYHYVNIVDLLGRGGYLDDARE 226
            PD +TFL LI+SC+H G++EEGLNLF  MR   G+EP M HY ++VDLLGR G LDDA  
Sbjct: 646  PDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYS 705

Query: 225  FIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRGSNYVQLLNLYVEAGL 46
            FI  M I  DR VWL LL A R H+N+E+GE+ A NL+KM+P RGSNYV LLNLY E  +
Sbjct: 706  FIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEM 765

Query: 45   KEKASNLRAVMRDKG 1
             ++A+NLRA M+ +G
Sbjct: 766  WDRAANLRASMKGRG 780


>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/135 (59%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
 Frame = -2

Query: 402  PDGITFLNLISSCNHCGLIEEGLNLFHSMRGN-GIEPNMYHYVNIVDLLGRGGYLDDARE 226
            PD +TFL LI+SC+H G++EEGLNLF  MR   G+EP M HY ++VDLLGR G LDDA  
Sbjct: 1051 PDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYS 1110

Query: 225  FIEKMAIPPDRGVWLSLLSASRVHQNVEIGEMAAHNLIKMDPQRGSNYVQLLNLYVEAGL 46
            FI  M I  DR VWL LL A R H+N+E+GE+ A NL+KM+P RGSNYV LLNLY E  +
Sbjct: 1111 FIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEM 1170

Query: 45   KEKASNLRAVMRDKG 1
             ++A+NLRA M+ +G
Sbjct: 1171 WDRAANLRASMKGRG 1185


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