BLASTX nr result

ID: Scutellaria22_contig00026929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026929
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35278.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   2e-07
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    59   3e-07
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]    59   3e-07
gb|ACT21194.1| zinc finger protein [Carica papaya]                     59   5e-07

>emb|CBI35278.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 9/66 (13%)
 Frame = +3

Query: 78  SRVKAMSTAGISGGN---------AAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGF 230
           S  K MS +G SGG+         AA Q YFCY+CN  V+I P  SPT++  CP+C+ GF
Sbjct: 40  SSSKTMSLSGFSGGSGGGGPGGGSAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGF 97

Query: 231 LEESDS 248
           LEE ++
Sbjct: 98  LEEVEN 103


>ref|XP_003534092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356531054|ref|XP_003534093.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max]
          Length = 376

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
 Frame = +3

Query: 96  STAGISGGNAAA---QQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEE 239
           S  G SGG+A +   +QYFC++CNR V+I P  SP+++L CP C+GGFLEE
Sbjct: 3   SAGGDSGGSATSGEPRQYFCHQCNRTVSISP--SPSSDLLCPTCNGGFLEE 51


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
           vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
           ubiquitin-protein ligase RING1 isoform 2 [Vitis
           vinifera]
          Length = 369

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +3

Query: 105 GISGGNAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 248
           G  GG+AA Q YFCY+CN  V+I P  SPT++  CP+C+ GFLEE ++
Sbjct: 14  GPGGGSAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVEN 59


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/48 (54%), Positives = 35/48 (72%)
 Frame = +3

Query: 105 GISGGNAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 248
           G  GG+AA Q YFCY+CN  V+I P  SPT++  CP+C+ GFLEE ++
Sbjct: 16  GPGGGSAAPQSYFCYQCNLTVSITP--SPTSDPLCPHCNDGFLEEVEN 61


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 22/43 (51%), Positives = 32/43 (74%)
 Frame = +3

Query: 120 NAAAQQYFCYECNRHVNIVPPSSPTAELFCPNCHGGFLEESDS 248
           +++ Q YFCY+CNR V I P   P+++L CP C+GGFLEE ++
Sbjct: 2   SSSGQPYFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELEN 44


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