BLASTX nr result

ID: Scutellaria22_contig00026917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026917
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   184   8e-45
emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]    97   2e-18
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         95   7e-18
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    95   7e-18
gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospe...    92   3e-17

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  184 bits (466), Expect = 8e-45
 Identities = 92/117 (78%), Positives = 96/117 (82%)
 Frame = +1

Query: 1   LISLGALESKGLVVTMRDGTLKATSGVLVMLKGIRKNNLYYYQXXXXXXXXXXXXXXXKK 180
           LISLGALESKGLVVTMRDG LKATSG LVMLKG+ KNNLYYYQ               KK
Sbjct: 294 LISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKK 353

Query: 181 DAEATKLWHMRLGHAGEKSLQTLAKQGLLKGSKACKLEFCEHCVLGKQQKVKFGTAI 351
           DAEATKLWHMRLGHAGEKSLQ   KQGLLKG+KACKLEFCEHCVLGKQ++VKFGTAI
Sbjct: 354 DAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAI 410


>emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]
          Length = 318

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/117 (43%), Positives = 65/117 (55%)
 Frame = +1

Query: 1   LISLGALESKGLVVTMRDGTLKATSGVLVMLKGIRKNNLYYYQXXXXXXXXXXXXXXXKK 180
           LISLG L+S G       G L+   G LV++KG + N LY  Q               + 
Sbjct: 96  LISLGTLDSNGCTYKAGGGVLRILKGALVVMKGNKINGLYTLQGGTIIGAVVVSIS--ES 153

Query: 181 DAEATKLWHMRLGHAGEKSLQTLAKQGLLKGSKACKLEFCEHCVLGKQQKVKFGTAI 351
             E T+LWHMRLGH  +K L  L+K+GLL G K  +L+FCEHCV GKQ +VKF   +
Sbjct: 154 IIETTRLWHMRLGHMSDKGLTILSKRGLLDGQKTGELDFCEHCVFGKQCRVKFSAGV 210


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/117 (44%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   LISLGALESKGLVVTMRDGTLKATSGVLVMLKG-IRKNNLYYYQXXXXXXXXXXXXXXXK 177
           LISL  L+ KG   +  DG LK T G LV++K  I+  NLY+ Q                
Sbjct: 369 LISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQGTTILGNVATVSDSLS 428

Query: 178 KDAEATKLWHMRLGHAGEKSLQTLAKQGLLKGSKACKLEFCEHCVLGKQQKVKFGTA 348
            +++AT LWHMRLGH  E  L  L+K+GLL G    KL+FCEHC+ GK ++VKF T+
Sbjct: 429 -NSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTS 484


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/117 (42%), Positives = 67/117 (57%)
 Frame = +1

Query: 1   LISLGALESKGLVVTMRDGTLKATSGVLVMLKGIRKNNLYYYQXXXXXXXXXXXXXXXKK 180
           LISL  L+SKG   + +DG L+   G  ++LKG+ +  LY+ Q                +
Sbjct: 348 LISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQGSTVTGSAHVASSEFHQ 407

Query: 181 DAEATKLWHMRLGHAGEKSLQTLAKQGLLKGSKACKLEFCEHCVLGKQQKVKFGTAI 351
             + TKLWH+RLGH GE+ +Q L+K+ LL G K   LEFCEHCV GK  + KF  AI
Sbjct: 408 K-DMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAI 463


>gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospermum
           erythrorhizon]
          Length = 244

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/116 (42%), Positives = 60/116 (51%)
 Frame = +1

Query: 1   LISLGALESKGLVVTMRDGTLKATSGVLVMLKGIRKNNLYYYQXXXXXXXXXXXXXXXKK 180
           LISL  LE  G  + + DG LK     LV++KG+   NLY                  K 
Sbjct: 44  LISLRLLEKNGCKIVLEDGVLKVVRRSLVVMKGVSHGNLYPLVGTMVTGDLAVGVVGHKD 103

Query: 181 DAEATKLWHMRLGHAGEKSLQTLAKQGLLKGSKACKLEFCEHCVLGKQQKVKFGTA 348
             E T +WHMRLGH  EK L  L+ QGLLK  K   +EFCEH V GK  ++KF T+
Sbjct: 104 QTECTMIWHMRLGHMSEKGLSLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTS 159


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