BLASTX nr result

ID: Scutellaria22_contig00026878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026878
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18267.3| unnamed protein product [Vitis vinifera]              174   5e-42
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   174   5e-42
ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   172   3e-41
ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  174 bits (442), Expect = 5e-42
 Identities = 80/93 (86%), Positives = 89/93 (95%)
 Frame = +3

Query: 3   RKRKNQITTLVEEALSKSNFENYSSKVHESLSCWTPDCIGFNLIEAVLCHICRKERSGAI 182
           RKRKN+IT LVE+AL+KS+FENYSS V +SLSCWTPDC+GFNLIEAVLCHICRKER GA+
Sbjct: 461 RKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVLCHICRKERPGAV 520

Query: 183 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 281
           LVFMTGWEDISCLRDQ++AHPLLGDPNRVLLLT
Sbjct: 521 LVFMTGWEDISCLRDQIRAHPLLGDPNRVLLLT 553


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  174 bits (442), Expect = 5e-42
 Identities = 80/93 (86%), Positives = 89/93 (95%)
 Frame = +3

Query: 3   RKRKNQITTLVEEALSKSNFENYSSKVHESLSCWTPDCIGFNLIEAVLCHICRKERSGAI 182
           RKRKN+IT LVE+AL+KS+FENYSS V +SLSCWTPDC+GFNLIEAVLCHICRKER GA+
Sbjct: 461 RKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVLCHICRKERPGAV 520

Query: 183 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 281
           LVFMTGWEDISCLRDQ++AHPLLGDPNRVLLLT
Sbjct: 521 LVFMTGWEDISCLRDQIRAHPLLGDPNRVLLLT 553


>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
           predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/93 (86%), Positives = 88/93 (94%)
 Frame = +3

Query: 3   RKRKNQITTLVEEALSKSNFENYSSKVHESLSCWTPDCIGFNLIEAVLCHICRKERSGAI 182
           RKRKNQITTLVE+AL+KS+FENYSS+  +SL+CW PDCIGFNLIEAVLCHICRKER GA+
Sbjct: 402 RKRKNQITTLVEDALNKSSFENYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERPGAV 461

Query: 183 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 281
           LVFMTGWEDIS LRDQLKAHPLLGDPNRVLL+T
Sbjct: 462 LVFMTGWEDISSLRDQLKAHPLLGDPNRVLLVT 494


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/93 (84%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   RKRKNQITTLVEEALSKSNFENYSSKVHESLSCWTPDCIGFNLIEAVLCHICRKERSGAI 182
           RKRKNQI TLVE+AL+KS+FE+YSS+  +SL+CW PDCIGFNLIEAVLCHICRKER G +
Sbjct: 455 RKRKNQIATLVEDALNKSSFESYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERPGGV 514

Query: 183 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 281
           LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT
Sbjct: 515 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 547


>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/93 (83%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   RKRKNQITTLVEEALSKSNFENYSSKVHESLSCWTPDCIGFNLIEAVLCHICRKERSGAI 182
           RKRKNQITTLVE+AL+ S+F+NYSS+  +SL+ W PDCIGFNLIEAVLCHICRKER GA+
Sbjct: 381 RKRKNQITTLVEDALTNSSFDNYSSRARDSLARWMPDCIGFNLIEAVLCHICRKERPGAV 440

Query: 183 LVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLT 281
           LVFMTGWEDISCLRDQLKAHPLLGDPNR+LLLT
Sbjct: 441 LVFMTGWEDISCLRDQLKAHPLLGDPNRILLLT 473


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