BLASTX nr result

ID: Scutellaria22_contig00026862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026862
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003624391.1| Pentatricopeptide repeat-containing protein ...   116   2e-24
ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_002448768.1| hypothetical protein SORBIDRAFT_06g032835 [S...    98   6e-19

>ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/101 (62%), Positives = 76/101 (75%)
 Frame = +1

Query: 1   LGFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFW 180
           LG+GSNV+L+NAFLT LIRH KL EA++VFE C  +D VSWNA+  G+L+     LP FW
Sbjct: 346 LGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFW 405

Query: 181 YRMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVKS 303
            RM  E V+PD FTFA++LTGLA LS   +GLQVHG LVKS
Sbjct: 406 RRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKS 446


>ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/101 (62%), Positives = 76/101 (75%)
 Frame = +1

Query: 1   LGFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFW 180
           LG+GSNV+L+NAFLT LIRH KL EA++VFE C  +D VSWNA+  G+L+     LP FW
Sbjct: 346 LGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAYFELPKFW 405

Query: 181 YRMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVKS 303
            RM  E V+PD FTFA++LTGLA LS   +GLQVHG LVKS
Sbjct: 406 RRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKS 446


>ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499406|gb|AES80609.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/100 (55%), Positives = 75/100 (75%)
 Frame = +1

Query: 4   GFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFWY 183
           G   NV+L+NAFLT L+R+GKL EA+Q+FE    RD V+WN +  G+L+F+   +P FW 
Sbjct: 137 GLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPVFWR 196

Query: 184 RMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVKS 303
            M  EGV+PDEFTFA+ LTGLA +S+L++G+QVH  LV+S
Sbjct: 197 YMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRS 236



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = +1

Query: 4   GFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLP-GFW 180
           G+G ++ + N+ +   +++ KL+E  + F+    +D+ SW  + DG L++    +     
Sbjct: 237 GYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVI 296

Query: 181 YRMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVK 300
            +M   GV+P++FT AT L   A L+++E G Q HGL +K
Sbjct: 297 AKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIK 336


>ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
           [Vitis vinifera] gi|296087996|emb|CBI35279.3| unnamed
           protein product [Vitis vinifera]
          Length = 598

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/100 (55%), Positives = 73/100 (73%)
 Frame = +1

Query: 1   LGFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFW 180
           LGF  NV+L+N F+T LIR  KL EA++VFE C  +D+VSWNA+  G ++F C  +PGFW
Sbjct: 178 LGFEWNVFLMNVFMTALIRSRKLAEALEVFEACRGKDVVSWNAVMAGLVQFCCGEVPGFW 237

Query: 181 YRMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVK 300
            RM  EGV+PD F F+ +L+GLA L +  +G+QVHG LVK
Sbjct: 238 RRMCCEGVKPDNFAFSGVLSGLAALGDGGMGVQVHGQLVK 277



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = +1

Query: 4   GFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFWY 183
           G G  V + N+ +   ++ G L+  ++ FE   +RD+ +WN +  G L  NC   PG   
Sbjct: 279 GHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQMAAGCL--NCGK-PGRAL 335

Query: 184 RMVGE----GVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVK 300
            ++ E    GVR ++FT AT LT  A L++LE G + HGL +K
Sbjct: 336 ELIEEMRRSGVRMNKFTLATALTACANLASLEEGKKAHGLRIK 378


>ref|XP_002448768.1| hypothetical protein SORBIDRAFT_06g032835 [Sorghum bicolor]
           gi|241939951|gb|EES13096.1| hypothetical protein
           SORBIDRAFT_06g032835 [Sorghum bicolor]
          Length = 598

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +1

Query: 1   LGFGSNVYLVNAFLTTLIRHGKLDEAMQVFEGCFDRDIVSWNAIFDGFLKFNCHYLPGFW 180
           LGF S+V+L NAFL  + RHG+L++A+++F G   RDIVSWN +  GF +         W
Sbjct: 173 LGFDSSVFLTNAFLAAMARHGQLEDAVRLFNGSSVRDIVSWNTLLAGFARHWSVQGWILW 232

Query: 181 YRMVGEGVRPDEFTFATLLTGLAELSNLEIGLQVHGLLVKS 303
            RMV E VR D F+F+T+L+GLA  ++L  GLQVH  LVKS
Sbjct: 233 RRMVREAVRADGFSFSTVLSGLAASTSLASGLQVHAQLVKS 273


Top