BLASTX nr result

ID: Scutellaria22_contig00026816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026816
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   144   1e-32
ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   134   1e-29
gb|AAF24521.1|AC007534_2 F7F22.4 [Arabidopsis thaliana]               133   1e-29
ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arab...   133   1e-29
ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana] ...   133   1e-29

>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis
           vinifera] gi|297745545|emb|CBI40710.3| unnamed protein
           product [Vitis vinifera]
          Length = 801

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/97 (73%), Positives = 86/97 (88%)
 Frame = -3

Query: 293 GAKAARLQRDKMKREQKRAAVLKEKRAISGPSSSPRVIVLFGLSACVNLNAVEEDILSLL 114
           GAKAARLQR+KM R+QKRAA+LKEKRA SG +S PRVIV+FGLSA VN+N+VE+D+L+LL
Sbjct: 45  GAKAARLQRNKMIRDQKRAAILKEKRASSGSTSPPRVIVIFGLSASVNVNSVEDDLLTLL 104

Query: 113 STEGNSSTFPAIASSEYKLRATVLKAPHGDLSTCMEM 3
           S++GN   F  +ASSEYKLR TVLKAPHGDLS+C+EM
Sbjct: 105 SSKGNEPVFSTVASSEYKLRTTVLKAPHGDLSSCIEM 141


>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = -3

Query: 293 GAKAARLQRDKMKREQKRAAVLKEKRAISGPSSSPRVIVLFGLSACVNLNAVEEDILSLL 114
           GA+A R+QR+KM REQKRAA+LKEKRA  G SS PRVIVLFGLSA VN++++ ED+L LL
Sbjct: 45  GARAVRIQRNKMLREQKRAALLKEKRASGGSSSPPRVIVLFGLSASVNIDSLAEDLLQLL 104

Query: 113 STEGNSSTFPAIASSEYKLRATVLKAPHGDLSTCMEM 3
           S EG ++    +ASSEYK+RATVLKAPHGDL +CMEM
Sbjct: 105 SPEGGAAVSSTVASSEYKMRATVLKAPHGDLLSCMEM 141


>gb|AAF24521.1|AC007534_2 F7F22.4 [Arabidopsis thaliana]
          Length = 813

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/97 (72%), Positives = 80/97 (82%)
 Frame = -3

Query: 293 GAKAARLQRDKMKREQKRAAVLKEKRAISGPSSSPRVIVLFGLSACVNLNAVEEDILSLL 114
           GAKAAR+QR KM REQKRAAVLKEKRA  G +S+PRVIVLF LSA V LN++ ED+L LL
Sbjct: 45  GAKAARVQRGKMLREQKRAAVLKEKRASGGINSAPRVIVLFPLSASVELNSLGEDVLKLL 104

Query: 113 STEGNSSTFPAIASSEYKLRATVLKAPHGDLSTCMEM 3
           S++G+      +ASSEYKLRATVLKAPHGDL TCMEM
Sbjct: 105 SSDGSGIASSTVASSEYKLRATVLKAPHGDLLTCMEM 141


>ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arabidopsis lyrata subsp.
           lyrata] gi|297339774|gb|EFH70191.1| hypothetical protein
           ARALYDRAFT_473739 [Arabidopsis lyrata subsp. lyrata]
          Length = 799

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/97 (72%), Positives = 80/97 (82%)
 Frame = -3

Query: 293 GAKAARLQRDKMKREQKRAAVLKEKRAISGPSSSPRVIVLFGLSACVNLNAVEEDILSLL 114
           GAKAAR+QR KM REQKRAAVLKEKRA  G  S+PRVIVLF LSA V LN++ ED+L LL
Sbjct: 45  GAKAARVQRGKMLREQKRAAVLKEKRASGGLHSAPRVIVLFPLSASVELNSLGEDVLKLL 104

Query: 113 STEGNSSTFPAIASSEYKLRATVLKAPHGDLSTCMEM 3
           S++G+ +    +ASSEYKLRATVLKAPHGDL TCMEM
Sbjct: 105 SSDGSGNCSSTVASSEYKLRATVLKAPHGDLLTCMEM 141


>ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13605690|gb|AAK32838.1|AF361826_1 At1g42440/F7F22_7
           [Arabidopsis thaliana] gi|22137072|gb|AAM91381.1|
           At1g42440/F7F22_7 [Arabidopsis thaliana]
           gi|23397226|gb|AAN31895.1| unknown protein [Arabidopsis
           thaliana] gi|332193797|gb|AEE31918.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 793

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/97 (72%), Positives = 80/97 (82%)
 Frame = -3

Query: 293 GAKAARLQRDKMKREQKRAAVLKEKRAISGPSSSPRVIVLFGLSACVNLNAVEEDILSLL 114
           GAKAAR+QR KM REQKRAAVLKEKRA  G +S+PRVIVLF LSA V LN++ ED+L LL
Sbjct: 45  GAKAARVQRGKMLREQKRAAVLKEKRASGGINSAPRVIVLFPLSASVELNSLGEDVLKLL 104

Query: 113 STEGNSSTFPAIASSEYKLRATVLKAPHGDLSTCMEM 3
           S++G+      +ASSEYKLRATVLKAPHGDL TCMEM
Sbjct: 105 SSDGSGIASSTVASSEYKLRATVLKAPHGDLLTCMEM 141


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