BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026714
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...   169   2e-40
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...   168   4e-40

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/146 (61%), Positives = 120/146 (82%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           QGLCI G+V+RAN FL  MLEN M+P+PLIWNV+I+ +G  G +  ALS++++M+ FG+ 
Sbjct: 387 QGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIP 446

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PNV+TYNALIH QI+ GNI  AH +K EML N ++PD+VTYNLLIGAAC+ G I +AL+L
Sbjct: 447 PNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRL 506

Query: 79  HNEMLRQGCEPDIITYTELLKCYCMR 2
           ++EMLR+G EPDIITYTEL++ +C+R
Sbjct: 507 YDEMLRRGYEPDIITYTELIRGFCIR 532



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           + LC+ G +  A      M++  +IP  L  N ++N   ++G +++A +L  +M+E G  
Sbjct: 139 RNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPS 198

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PN  T+N  I     N N+DKA YL + M ++ + P+ VTYN+LI A C  G +  A +L
Sbjct: 199 PNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKL 258

Query: 79  HNEMLRQGC---EPDIITYT 29
             ++L   C     DIIT T
Sbjct: 259 LEKILDDDCGKETSDIITST 278



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 39/184 (21%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMI-PKPLIWNVMINAYGESGQVQEALSLKNK------ 281
           +G C++ NV +A L+LF  + NS I P  + +N++I+A  + G +++A  L  K      
Sbjct: 209 KGYCLNNNVDKA-LYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDC 267

Query: 280 --------------------------------MIEFGVRPNVYTYNALIHTQIRNGNIDK 197
                                           M++ G + +V  YN LIH      +++ 
Sbjct: 268 GKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNS 327

Query: 196 AHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLK 17
           A+    EM    L PD+ TYN LI   C +G++  A  +H  M + G  PD+I+Y  +++
Sbjct: 328 AYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQ 387

Query: 16  CYCM 5
             C+
Sbjct: 388 GLCI 391



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC +G++ +A+  +  MLE    P    +N  I  Y  +  V +AL L + M   G+ P
Sbjct: 175 GLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGP 234

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSN------------------CLFP------- 152
           N  TYN LIH   + G +  A  L  ++L +                  CL         
Sbjct: 235 NKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQAL 294

Query: 151 -------------DLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCY 11
                        D+V YN+LI   C + D++ A +   EM ++G  PDI TY  L+  +
Sbjct: 295 VHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGF 354

Query: 10  C 8
           C
Sbjct: 355 C 355



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/139 (24%), Positives = 72/139 (51%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           G C+  ++  A  +   M +  ++P    +N +I+ + + G + EA  +   M + G  P
Sbjct: 318 GFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAP 377

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLH 77
           ++ +Y  +I     +G++ +A+     ML N + P+ + +N++I      GD+S AL + 
Sbjct: 378 DLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIR 437

Query: 76  NEMLRQGCEPDIITYTELL 20
           ++M+  G  P++ TY  L+
Sbjct: 438 DQMVSFGIPPNVFTYNALI 456



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/105 (35%), Positives = 59/105 (56%)
 Frame = -1

Query: 316 GQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTY 137
           G+++ AL L+NKMI+ GV P+V T+N L++   + G+++KA  L  EML     P+  T+
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 136 NLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYCMR 2
           N  I   C   ++  AL L + M   G  P+ +TY  L+   C +
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKK 249



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/139 (26%), Positives = 68/139 (48%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           G    G++V+A +    ML+       + +NV+I+ +     +  A     +M + G+ P
Sbjct: 283 GCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLP 342

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLH 77
           +++TYN LI    + GN+D+A Y+   M      PDL++Y ++I   C  GD+  A Q  
Sbjct: 343 DIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFL 402

Query: 76  NEMLRQGCEPDIITYTELL 20
             ML     P+ + +  ++
Sbjct: 403 VCMLENLMVPEPLIWNVVI 421


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/146 (57%), Positives = 114/146 (78%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           QGLC+ G+V +AN +L   LE SMIP+PL+WN++I+ YG  G +  A +++++M+ FGV 
Sbjct: 306 QGLCVCGDVDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDICNAFAIRDRMLSFGVV 365

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PNV+TYNALIH Q++ GNI  A++LK +ML   LFPD+VTYNLLIGAA   G I YALQL
Sbjct: 366 PNVFTYNALIHAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAAHAGHIHYALQL 425

Query: 79  HNEMLRQGCEPDIITYTELLKCYCMR 2
           ++EMLR GC PD+ITYTEL++ YC++
Sbjct: 426 YDEMLRGGCNPDMITYTELIRGYCVK 451



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/122 (27%), Positives = 64/122 (52%)
 Frame = -1

Query: 385 MLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGN 206
           ML+  ++P    +N ++++  +SG++ EA  + + M+  GV P+  +Y  +I      G+
Sbjct: 254 MLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHDVMLRMGVAPDEVSYKLIIQGLCVCGD 313

Query: 205 IDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTE 26
           +DKA+      L   + P+ + +NL+I      GDI  A  + + ML  G  P++ TY  
Sbjct: 314 VDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDICNAFAIRDRMLSFGVVPNVFTYNA 373

Query: 25  LL 20
           L+
Sbjct: 374 LI 375



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/105 (33%), Positives = 57/105 (54%)
 Frame = -1

Query: 316 GQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTY 137
           G++  AL L++KMI+ G  P+V T+N +++   +   ++KA +L  EML     P+  TY
Sbjct: 78  GKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATY 137

Query: 136 NLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYCMR 2
           N  I   C L  +  AL L + M   G +P+ +T+  LL   C +
Sbjct: 138 NTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKK 182



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 49/203 (24%), Positives = 74/203 (36%), Gaps = 59/203 (29%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC    + +A+  +  ML+    P    +N  I  Y    +V +AL L + M   G +P
Sbjct: 108 GLCKMIELEKADWLIREMLDKGPSPNCATYNTFIKGYCLLDKVDKALHLFSSMANSGTKP 167

Query: 256 NVYTYNALIHTQI-------------------RNGNIDKAHYLKT--------------- 179
           N  T+N L+H                      R GNI   H   T               
Sbjct: 168 NRVTFNTLLHALCKKDLLTEGKKLLGEILDDGRKGNIKCYHLNYTYGWFYQEWRYSSGAW 227

Query: 178 -------------------------EMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHN 74
                                    +ML   L PD+ TYN L+ + C  G +  A  +H+
Sbjct: 228 YLGFNVGGGYPNGSREMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHD 287

Query: 73  EMLRQGCEPDIITYTELLKCYCM 5
            MLR G  PD ++Y  +++  C+
Sbjct: 288 VMLRMGVAPDEVSYKLIIQGLCV 310



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/134 (28%), Positives = 66/134 (49%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPN 254
           LC+ G +  A      M++   +P  L  N M+N   +  ++++A  L  +M++ G  PN
Sbjct: 74  LCLGGKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPN 133

Query: 253 VYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHN 74
             TYN  I        +DKA +L + M ++   P+ VT+N L+ A C    ++   +L  
Sbjct: 134 CATYNTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLG 193

Query: 73  EMLRQGCEPDIITY 32
           E+L  G + +I  Y
Sbjct: 194 EILDDGRKGNIKCY 207



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/103 (30%), Positives = 57/103 (55%)
 Frame = -1

Query: 319 SGQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVT 140
           S +++ A S   +M++ G+ P+V+TYN L+ +  ++G +D+A Y+   ML   + PD V+
Sbjct: 241 SREMKLAYSYSCQMLKMGLLPDVFTYNTLVSSLCKSGKLDEACYMHDVMLRMGVAPDEVS 300

Query: 139 YNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCY 11
           Y L+I   C  GD+  A    N  L +   P+ + +  ++  Y
Sbjct: 301 YKLIIQGLCVCGDVDKANGYLNCTLEKSMIPEPLVWNLIIDGY 343


>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  175 bits (444), Expect = 3e-42
 Identities = 79/146 (54%), Positives = 112/146 (76%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           +GLC +G +VRA   L+ ML N M+PKPLIWN++I+ YG    +  A   +++M+ FGV 
Sbjct: 375 RGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVC 434

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PNV+TYNALI  Q+++GN   A  LK EM+S CLFPD+VTYNLLIGAAC++G + +AL L
Sbjct: 435 PNVFTYNALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLL 494

Query: 79  HNEMLRQGCEPDIITYTELLKCYCMR 2
           H++M+++G EPD+ITYTEL++ +C+R
Sbjct: 495 HDQMVQRGYEPDLITYTELVRGFCIR 520



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFYMLENSM---IPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGV 263
           LC  G ++ A   L  +L++     IP  +I  V +++Y + G + +AL+L N+M++   
Sbjct: 234 LCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCT 293

Query: 262 RPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQ 83
           + +V  YN LI+   ++  ++ A+    EM    L PD  TYN++IGA C  G IS A  
Sbjct: 294 KVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACY 353

Query: 82  LHNEMLRQGCEPDIITYTELLKCYC 8
               M   G  PD ITY  +++  C
Sbjct: 354 TVGVMSNMGIMPDQITYQIVIRGLC 378



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPN 254
           LC+ G +  A      M +  ++      N ++N   + G + +A  +  +M+EFG RPN
Sbjct: 129 LCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPN 188

Query: 253 VYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHN 74
             TYN LI        +D+A YL + M    + P+ VT  +L+ A C+ G +  A ++  
Sbjct: 189 CATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLE 248

Query: 73  EMLRQGCE---PDIITYTELLKCY 11
           E+L+   E   PD++  T  +  Y
Sbjct: 249 EVLKDDDEKDIPDLVISTVFMDSY 272



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/139 (28%), Positives = 66/139 (47%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           G C S  +  A  +   M +  ++P    +N++I A  + G++ EA      M   G+ P
Sbjct: 306 GFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMP 365

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLH 77
           +  TY  +I      G I +A +L   ML+N + P  + +NL+I       D+S A    
Sbjct: 366 DQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTR 425

Query: 76  NEMLRQGCEPDIITYTELL 20
           ++ML  G  P++ TY  L+
Sbjct: 426 DQMLSFGVCPNVFTYNALI 444



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC  G + +A+L +  MLE    P    +N +I  Y     V  AL L + M   G+ P
Sbjct: 163 GLCKIGLLDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILP 222

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSN---CLFPDLVTYNLLIGAACDLGDISYAL 86
           N  T   L+H     G + +A  +  E+L +      PDLV   + + +    G I  AL
Sbjct: 223 NRVTCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQAL 282

Query: 85  QLHNEMLRQGCEPDIITYTELLKCYC 8
            L N+ML+   + D++ Y  L+  +C
Sbjct: 283 NLWNQMLQNCTKVDVVAYNVLINGFC 308



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/137 (27%), Positives = 66/137 (48%)
 Frame = -1

Query: 421 GNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPNVYTY 242
           G +++A      ML+N      + +NV+IN + +S Q+  A     +M + G+ P+ +TY
Sbjct: 276 GAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTY 335

Query: 241 NALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLR 62
           N +I    + G I +A Y    M +  + PD +TY ++I   C  G+I  A  L   ML 
Sbjct: 336 NIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLLWCMLN 395

Query: 61  QGCEPDIITYTELLKCY 11
               P  + +  ++  Y
Sbjct: 396 NLMVPKPLIWNLIIDLY 412


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/146 (55%), Positives = 108/146 (73%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           QGLC  G+V++AN  L  MLE SM+P+  +WN++I+ +   G    A S++++M+ FGV 
Sbjct: 380 QGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVV 439

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PNV+TYNALIH Q++ GNI  A+ LK  ML + LFPD++TYNLLIG AC+ G IS A+QL
Sbjct: 440 PNVFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQL 499

Query: 79  HNEMLRQGCEPDIITYTELLKCYCMR 2
           + EMLR G EPDIITYTEL++  CMR
Sbjct: 500 YYEMLRSGHEPDIITYTELIRGLCMR 525



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPN 254
           LC++G +  A      +L    +P  L  N ++N    SG +Q+A  L  +M+E G  PN
Sbjct: 135 LCLAGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPN 194

Query: 253 VYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHN 74
             T+N  I       N+DKA YL + M  + + P+ VT N+L+ A C  G +  A +L  
Sbjct: 195 CATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLG 254

Query: 73  EML--RQGCEPDIITYTELL 20
           E+L   +    ++IT T L+
Sbjct: 255 ELLDDNEKARVNLITSTILM 274



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/139 (26%), Positives = 71/139 (51%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           G C++ N+  A  +   ML+  ++P    +N +I+   ++G++ EA  + + M+  GV P
Sbjct: 311 GFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAP 370

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLH 77
           +  +Y  +I      G++ KA+     ML   + P+   +NL+I      GD + A  + 
Sbjct: 371 DQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIR 430

Query: 76  NEMLRQGCEPDIITYTELL 20
           ++ML  G  P++ TY  L+
Sbjct: 431 DQMLSFGVVPNVFTYNALI 449



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 44/143 (30%), Positives = 68/143 (47%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC +G +  A      ML   + P  + + ++I      G V +A    + M+E  + P
Sbjct: 346 GLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLHCMLEKSMVP 405

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLH 77
             + +N +I    R G+   A  ++ +MLS  + P++ TYN LI A    G+I  A  L 
Sbjct: 406 EAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYNALIHAQVKTGNIVDAYSLK 465

Query: 76  NEMLRQGCEPDIITYTELLKCYC 8
             ML  G  PD+ITY  L+   C
Sbjct: 466 KMMLCHGLFPDVITYNLLIGTAC 488



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 37/180 (20%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC SG++ +A+  +  MLE    P    +N  I  Y     V +AL L + M + GV+P
Sbjct: 169 GLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKP 228

Query: 256 NVYTYNALIHTQIRNGNIDKAHYLKTEML------------------------------- 170
           N  T N L+H   + G ++ A  L  E+L                               
Sbjct: 229 NRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALG 288

Query: 169 ------SNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYC 8
                  N    D V YN+LI   C   ++  A     +ML++G  PDI TY  L+   C
Sbjct: 289 IWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLC 348



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 38/184 (20%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMI-PKPLIWNVMINAYGESGQVQEALSLKNKMIEFG- 266
           +G C+  NV +A L+LF  + +S + P  +  N++++A  + G +++A  L  ++++   
Sbjct: 203 KGYCLLNNVDKA-LYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNE 261

Query: 265 -VRPNVYT-----------------------------------YNALIHTQIRNGNIDKA 194
             R N+ T                                   YN LIH      N+  A
Sbjct: 262 KARVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLA 321

Query: 193 HYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKC 14
           +    +ML   L PD+ TYN LI   C  G +  A  +H+ MLR G  PD I+Y  +++ 
Sbjct: 322 YSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQG 381

Query: 13  YCMR 2
            C R
Sbjct: 382 LCTR 385



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
 Frame = -1

Query: 430 CI-SGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPN 254
           CI +G++V+A    + M +N+ +   + +NV+I+ +  +  ++ A S    M++ G+ P+
Sbjct: 277 CIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPD 336

Query: 253 VYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHN 74
           ++TYN LI    + G + +A Y+   ML   + PD ++Y ++I   C  GD+  A +  +
Sbjct: 337 IFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKANEHLH 396

Query: 73  EMLRQGCEPD 44
            ML +   P+
Sbjct: 397 CMLEKSMVPE 406



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/106 (31%), Positives = 56/106 (52%)
 Frame = -1

Query: 319 SGQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVT 140
           +G++  AL L+ K++  G  P++ T+N L++    +G++ KA  L  EML     P+  T
Sbjct: 138 AGKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCAT 197

Query: 139 YNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYCMR 2
           +N  I   C L ++  AL L + M   G +P+ +T   L+   C R
Sbjct: 198 FNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKR 243


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g24830 gi|22655280|gb|AAM98230.1| putative protein
           [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
           At5g24830 [Arabidopsis thaliana]
           gi|332005984|gb|AED93367.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/146 (54%), Positives = 107/146 (73%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           QGLCI G+V RAN FL  ML++S++P+ L+WNV+I+ YG  G    ALS+ N M+ +GV+
Sbjct: 378 QGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVK 437

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           PNVYT NALIH  ++ G +  A ++K EM S  + PD  TYNLL+GAAC LG +  A QL
Sbjct: 438 PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQL 497

Query: 79  HNEMLRQGCEPDIITYTELLKCYCMR 2
           ++EMLR+GC+PDIITYTEL++  C +
Sbjct: 498 YDEMLRRGCQPDIITYTELVRGLCWK 523



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/143 (31%), Positives = 77/143 (53%)
 Frame = -1

Query: 439 QGLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVR 260
           +GLC SGN+V A  F+  M++  + P    +N +I+A  + G+  EA  L   M   GV 
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367

Query: 259 PNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQL 80
           P+  +Y  +I     +G++++A+     ML + L P+++ +N++I      GD S AL +
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427

Query: 79  HNEMLRQGCEPDIITYTELLKCY 11
            N ML  G +P++ T   L+  Y
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGY 450



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/138 (28%), Positives = 71/138 (51%)
 Frame = -1

Query: 424 SGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPNVYT 245
           +GNVV+A      M + ++    +++NV+I     SG +  A      M++ GV P+V+T
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337

Query: 244 YNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEML 65
           YN LI    + G  D+A  L   M +  + PD ++Y ++I   C  GD++ A +    ML
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397

Query: 64  RQGCEPDIITYTELLKCY 11
           +    P+++ +  ++  Y
Sbjct: 398 KSSLLPEVLLWNVVIDGY 415



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFY-MLENSMIPKPL---IWNVMINAYGESGQVQEALSLKNKMIEFG 266
           LC  G +   N  L   +L++S    PL   I  +++++  ++G V +AL +  +M +  
Sbjct: 236 LCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295

Query: 265 VRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYAL 86
           V  +   YN +I     +GN+  A+    +M+   + PD+ TYN LI A C  G    A 
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355

Query: 85  QLHNEMLRQGCEPDIITYTELLKCYCM 5
            LH  M   G  PD I+Y  +++  C+
Sbjct: 356 DLHGTMQNGGVAPDQISYKVIIQGLCI 382



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 39/182 (21%)
 Frame = -1

Query: 436 GLCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRP 257
           GLC +G + +A+  +  M E    P  + +N +I        V +AL L N M ++G+RP
Sbjct: 165 GLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRP 224

Query: 256 NVYTYNALIH---------------------------------------TQIRNGNIDKA 194
           N  T N ++H                                       +  +NGN+ +A
Sbjct: 225 NRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQA 284

Query: 193 HYLKTEMLSNCLFPDLVTYNLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKC 14
             +  EM    +  D V YN++I   C  G++  A     +M+++G  PD+ TY  L+  
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344

Query: 13  YC 8
            C
Sbjct: 345 LC 346



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/105 (34%), Positives = 56/105 (53%)
 Frame = -1

Query: 316 GQVQEALSLKNKMIEFGVRPNVYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTY 137
           G++  AL L+ KMI  GV P + T+N L++   + G I+KA  L  EM      P+ V+Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194

Query: 136 NLLIGAACDLGDISYALQLHNEMLRQGCEPDIITYTELLKCYCMR 2
           N LI   C + ++  AL L N M + G  P+ +T   ++   C +
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQK 239



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/112 (32%), Positives = 57/112 (50%)
 Frame = -1

Query: 433 LCISGNVVRANLFLFYMLENSMIPKPLIWNVMINAYGESGQVQEALSLKNKMIEFGVRPN 254
           LC+ G +  A      M+ + +IP  +  N ++N   ++G +++A  L  +M E G  PN
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190

Query: 253 VYTYNALIHTQIRNGNIDKAHYLKTEMLSNCLFPDLVTYNLLIGAACDLGDI 98
             +YN LI       N+DKA YL   M    + P+ VT N+++ A C  G I
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242