BLASTX nr result

ID: Scutellaria22_contig00026660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026660
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37461.1| unknown [Lotus japonicus]                              198   3e-49
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   197   6e-49
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein lig...   189   2e-46

>gb|AFK37461.1| unknown [Lotus japonicus]
          Length = 433

 Score =  198 bits (504), Expect = 3e-49
 Identities = 93/133 (69%), Positives = 109/133 (81%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           +RWMS   TVMSFGDG+ GALGL  S +G+G DAYEPTP+P LP D+ SV AGHYHSLAV
Sbjct: 21  QRWMS---TVMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPSDIVSVHAGHYHSLAV 77

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDEVGVLAAFASGVVSAAIGEGGT 481
           TSQGH+WAWGRN+EAQLG   +S RE WN P+ V GL+ V V AA+ASGVVSAA+G+ G+
Sbjct: 78  TSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKVCAAYASGVVSAAVGDDGS 137

Query: 482 LWVWGKSKRGQLG 520
           +WVWGKSKRGQLG
Sbjct: 138 VWVWGKSKRGQLG 150



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
 Frame = +2

Query: 143 GTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV------- 301
           G ++S G  + G LG A   +G+        PV        S+AAG  HSLA+       
Sbjct: 275 GALLSCGSDAYGQLGRARPDLGIFPVDISFKPV--------SIAAGLGHSLAICELDESD 326

Query: 302 TSQG--HVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDEVGVLAAFASGVVSAAIGEG 475
           +S G  ++ +WG N  +QLGR         N P  +  LD    ++     V S A+   
Sbjct: 327 SSVGTTNIASWGWNQSSQLGRTGPG-----NLPSLIDALDGENPVSVSGGRVHSVALTAK 381

Query: 476 GTLWVWGKSKRGQLG 520
           G +WVWG  K G+LG
Sbjct: 382 GEMWVWGSGKNGRLG 396


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/133 (71%), Positives = 107/133 (80%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           R + S   +VMSFGDGS GALGL  S IGLG DAYEPTPVPGLP DVCSV+AGHYHSLAV
Sbjct: 8   RCFSSSARSVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAV 67

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDEVGVLAAFASGVVSAAIGEGGT 481
           T+QG VWAWGRN E QLGR   +PR+ WN P +V GL++V V AAFASGV+S AIG+ G+
Sbjct: 68  TAQGEVWAWGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGS 127

Query: 482 LWVWGKSKRGQLG 520
           LWVWGKSK GQLG
Sbjct: 128 LWVWGKSKHGQLG 140


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 432

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/133 (71%), Positives = 107/133 (80%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           R + S   +VMSFGDGS GALGL  S IGLG DAYEPTPVPGLP DVCSV+AGHYHSLAV
Sbjct: 14  RCFSSSARSVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAV 73

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDEVGVLAAFASGVVSAAIGEGGT 481
           T+QG VWAWGRN E QLGR   +PR+ WN P +V GL++V V AAFASGV+S AIG+ G+
Sbjct: 74  TAQGEVWAWGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGS 133

Query: 482 LWVWGKSKRGQLG 520
           LWVWGKSK GQLG
Sbjct: 134 LWVWGKSKHGQLG 146


>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/123 (74%), Positives = 101/123 (82%)
 Frame = +2

Query: 152 MSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAVTSQGHVWAWG 331
           MSFGDGS GALGL  S IG G DAYEPTPV GLP D+ SV+AGHYHSLAVTS G +WAWG
Sbjct: 1   MSFGDGSHGALGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWG 60

Query: 332 RNSEAQLGRDHASPREMWNNPQKVAGLDEVGVLAAFASGVVSAAIGEGGTLWVWGKSKRG 511
           RN E QLGR   SPR+ WN P++V GLD+V V AAFASGVVSAAIG+ G+LWVWGKSKRG
Sbjct: 61  RNHEVQLGRGLLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKRG 120

Query: 512 QLG 520
           QLG
Sbjct: 121 QLG 123


>ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 432

 Score =  189 bits (481), Expect = 2e-46
 Identities = 96/155 (61%), Positives = 117/155 (75%), Gaps = 1/155 (0%)
 Frame = +2

Query: 59  IMLRSLSKKKISQSGLLIGLSRRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTP 238
           +++R L  K +S      G+  RWMS   TVM FGDGSQGA+G   SP+G+G DAYEPTP
Sbjct: 1   MLVRKLKLKAVS------GVHLRWMS---TVMCFGDGSQGAVG---SPVGVGLDAYEPTP 48

Query: 239 VPGLPPDVCSVAAGHYHSLAVTSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAG-LD 415
           V  LP D+ SV AGHYHSLA+TS GH+WAWGRN+EAQLGR  +S RE W+ P++V G L+
Sbjct: 49  VTALPSDIVSVHAGHYHSLALTSHGHLWAWGRNNEAQLGRGPSSSRESWHEPERVKGLLE 108

Query: 416 EVGVLAAFASGVVSAAIGEGGTLWVWGKSKRGQLG 520
            V V  AFASGVVSAA+G+ G++WVWGKSKRGQLG
Sbjct: 109 NVNVCGAFASGVVSAALGDDGSVWVWGKSKRGQLG 143


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