BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026503
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma...   166   1e-39
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   129   3e-28
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   126   2e-27
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   107   8e-22
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              107   8e-22

>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
          Length = 1112

 Score =  166 bits (421), Expect = 1e-39
 Identities = 92/168 (54%), Positives = 114/168 (67%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   RRNLLDEVSCGLQEAEMVSDISLLMVDRNQDFLVESSEESGYMENFLKGR--ILVSQQTK 176
           R+NLLD+++CGL+EAE +SDISLLMV  NQ FL+E+SEE    E+ LK +  + V+QQT 
Sbjct: 314 RKNLLDDIACGLEEAEKMSDISLLMVGHNQRFLIENSEED---EDMLKSKEHLYVAQQTS 370

Query: 177 PELVQALISASKSVFRDMLNLVYKYSGRNNSFITMLKAGSKGNLQKLFXXXXXXXXXXXX 356
            EL QA + ASKSVFRDM NL+Y Y+G  NS + MLKAGSKGNLQKLF            
Sbjct: 371 AELCQASLFASKSVFRDMQNLIYHYAGDTNSLLAMLKAGSKGNLQKLFQHSMCLGLQHSL 430

Query: 357 XXXXXXIPRHLSCASWNNHKD-LSGDHLHGSPSISDSYIPCAVIPSSF 497
                 +P +LSCASWNN K+ LS   L G+  I DSYIPC V+ SS+
Sbjct: 431 TPVSFSMPHYLSCASWNNQKNHLSLYRLDGTREILDSYIPCTVVSSSY 478


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  129 bits (323), Expect = 3e-28
 Identities = 77/166 (46%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   RRNLLDEVSCGLQEAEMVSDISLLMVDRNQDFLVESSEESGYMENFLKGRILVSQQTKPE 182
           R N++DEV  GLQEAE +S I LLM+  N+DFL  + EES     F    + + QQ    
Sbjct: 314 RENMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSAS 373

Query: 183 LVQALISASKSVFRDMLNLVYKYSGRNNSFITMLKAGSKGNLQKLFXXXXXXXXXXXXXX 362
           L QA  SA K VFRD+ NLVY Y+  +NS + MLKAGSKGNL KL               
Sbjct: 374 LSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLGLQQSLVP 433

Query: 363 XXXXIPRHLSCASWNNHKD-LSGDHLHGSPSISDSYIPCAVIPSSF 497
               +PR LSC +WNNHK  L  +  H  P    SYIP AV+ SSF
Sbjct: 434 VSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSF 479


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/163 (39%), Positives = 96/163 (58%)
 Frame = +3

Query: 9    NLLDEVSCGLQEAEMVSDISLLMVDRNQDFLVESSEESGYMENFLKGRILVSQQTKPELV 188
            N++D++ CGLQEAE   ++  LMVD +++ L+ + E++ ++ +    R++  +Q    L 
Sbjct: 649  NMMDDIFCGLQEAEETCNLKQLMVDSHKEILIGNDEDNQHLLSIAVERLIYEKQKSAALN 708

Query: 189  QALISASKSVFRDMLNLVYKYSGRNNSFITMLKAGSKGNLQKLFXXXXXXXXXXXXXXXX 368
            QA + A K VFRD+ NLVYKYSG++NS +TM KAGSKGNL KL                 
Sbjct: 709  QASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVTLS 768

Query: 369  XXIPRHLSCASWNNHKDLSGDHLHGSPSISDSYIPCAVIPSSF 497
              +P  LSCA+WN+ K        G P  + S+IP AV+ +SF
Sbjct: 769  FSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSF 811


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3    RRNLLDEVSCGLQEAEMVSDISLLMVDRNQDFLVESSE--ESGYMENFLKGRILVSQQTK 176
            R+N++DEV CGL  AE       L+VD +Q+FL+ S E  ++G + +     +   +Q  
Sbjct: 669  RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQS--LWYERQGS 726

Query: 177  PELVQALISASKSVFRDMLNLVYKYSGRNNSFITMLKAGSKGNLQKLFXXXXXXXXXXXX 356
              L Q+ + A K  FRD+ NLVY+Y+ ++NS + MLKAGSKGNL KL             
Sbjct: 727  AALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSL 786

Query: 357  XXXXXXIPRHLSCASWNNHKDLSGDHLHGSPSISDSYIPCAVIPSSF 497
                  IP  LSCA+WN  K + G   + +   ++SYIP AV+ +SF
Sbjct: 787  VPLSFKIPHQLSCAAWNKQK-VPGLIQNDTSEYAESYIPYAVVENSF 832


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/167 (38%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
 Frame = +3

Query: 3    RRNLLDEVSCGLQEAEMVSDISLLMVDRNQDFLVESSE--ESGYMENFLKGRILVSQQTK 176
            R+N++DEV CGL  AE       L+VD +Q+FL+ S E  ++G + +     +   +Q  
Sbjct: 538  RKNMIDEVFCGLLVAEQTCHFKQLLVDSSQNFLIGSGENNQNGVVPDVQS--LWYERQGS 595

Query: 177  PELVQALISASKSVFRDMLNLVYKYSGRNNSFITMLKAGSKGNLQKLFXXXXXXXXXXXX 356
              L Q+ + A K  FRD+ NLVY+Y+ ++NS + MLKAGSKGNL KL             
Sbjct: 596  AALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSL 655

Query: 357  XXXXXXIPRHLSCASWNNHKDLSGDHLHGSPSISDSYIPCAVIPSSF 497
                  IP  LSCA+WN  K + G   + +   ++SYIP AV+ +SF
Sbjct: 656  VPLSFKIPHQLSCAAWNKQK-VPGLIQNDTSEYAESYIPYAVVENSF 701