BLASTX nr result

ID: Scutellaria22_contig00026421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026421
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   106   2e-21
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20
gb|ABK93461.1| unknown [Populus trichocarpa]                          102   2e-20
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   102   4e-20
ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subuni...   101   7e-20

>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  106 bits (265), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
 Frame = -1

Query: 264 HPSLVHSEYAVVALSD-DRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVCNNGNDNDL- 91
           HPSLVHSEYAV+ LS+ D N N RL+VW+DFHCTLRLCGSV+KTLL+L +  N +   L 
Sbjct: 151 HPSLVHSEYAVLVLSEEDANANGRLRVWSDFHCTLRLCGSVAKTLLVLGINKNCHGTTLP 210

Query: 90  SSLEHYSVEERIVTRWNPELSRE 22
           S LE YSVEER   RW+P+ SRE
Sbjct: 211 SCLEKYSVEERTFARWSPQQSRE 233


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/83 (61%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -1

Query: 264 HPSLVHSEYAVVALSDDRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVCNNGNDN-DLS 88
           HPSLVHSEYAV+ LS+      RL+VW+DFHCT+RLCGSV+KTLL+L+V  NG+     S
Sbjct: 151 HPSLVHSEYAVIVLSE--GDTGRLRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPS 208

Query: 87  SLEHYSVEERIVTRWNPELSREN 19
            LE YSVEE  +TRW+PE SR++
Sbjct: 209 CLERYSVEECTITRWSPEQSRDD 231


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/83 (61%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -1

Query: 264 HPSLVHSEYAVVALSDDRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVCNNGNDN-DLS 88
           HPSLVHSEYAV+ LS+      RL+VW+DFHCT+RLCGSV+KTLL+L+V  NG+     S
Sbjct: 151 HPSLVHSEYAVIVLSE--GDTGRLRVWSDFHCTIRLCGSVAKTLLILNVDKNGHGAISPS 208

Query: 87  SLEHYSVEERIVTRWNPELSREN 19
            LE YSVEE  +TRW+PE SR++
Sbjct: 209 CLERYSVEECTITRWSPEQSRDD 231


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/88 (56%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = -1

Query: 264 HPSLVHSEYAVVALSDDR-NTNARLKVWTDFHCTLRLCGSVSKTLLLLHVCNNGNDNDLS 88
           HP+LVHSEYAV+ LS++  N N RL+VW+DF CT+RLCGSV+KTLL++H+  NG+     
Sbjct: 151 HPALVHSEYAVLVLSEENENANGRLRVWSDFDCTIRLCGSVAKTLLVIHINKNGHGATTP 210

Query: 87  -SLEHYSVEERIVTRWNPELSRENHTME 7
             L+ YSVEER +TRW+ E  RE  T E
Sbjct: 211 LCLKKYSVEERTITRWSAEQCREVQTPE 238


>ref|XP_004171728.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-2-like [Cucumis
           sativus]
          Length = 281

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/85 (61%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
 Frame = -1

Query: 264 HPSLVHSEYAVVALSD--DRNTNARLKVWTDFHCTLRLCGSVSKTLLLLHVCNNGND-ND 94
           HPSLVHSE+AV+ L +  D N N RL+VW+DF CT+RLCGSV+KTLL+L V +NG+    
Sbjct: 193 HPSLVHSEFAVLVLCEATDSNGNGRLRVWSDFLCTVRLCGSVAKTLLVLTVNDNGSGFVS 252

Query: 93  LSSLEHYSVEERIVTRWNPELSREN 19
            S L+ YS+EER VTRW+PE  REN
Sbjct: 253 PSCLDSYSIEERTVTRWSPEQCREN 277


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