BLASTX nr result

ID: Scutellaria22_contig00026358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026358
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16239.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...    77   1e-12
emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera]    67   1e-09
gb|AAX40988.1| RAD51B [Arabidopsis thaliana]                           66   3e-09
ref|NP_001031438.1| DNA repair protein RAD51-like 2 [Arabidopsis...    66   3e-09

>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 6   IKIAKSSISPSVGFFFNITSSGISLLNDDEVEMLGPEANTIHCQGHSGIINYDSEVLQ 179
           +K+AKS ISP + F FNIT SGISLLND+ +EM GP+ +TIH QGH  IIN+DSE LQ
Sbjct: 314 LKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQISTIHYQGHEDIINFDSERLQ 371


>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = +3

Query: 6   IKIAKSSISPSVGFFFNITSSGISLLNDDEVEMLGPEANTIHCQGHSGIINYDSE 170
           +K+AKS ISP + F FNIT SGISLLND+ +EM GP+ +TIH QGH  IIN+DSE
Sbjct: 314 LKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQISTIHYQGHEDIINFDSE 368


>emb|CAN73845.1| hypothetical protein VITISV_001338 [Vitis vinifera]
          Length = 453

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = +3

Query: 6   IKIAKSSISPSVGFFFNITSSGISLLNDDEVEMLGPEANTIHCQGHSG 149
           +K+AKS ISP + F FNIT SGISLLND+ +EM GP+ +TIH QGH G
Sbjct: 259 LKVAKSPISPPLAFPFNITPSGISLLNDEGIEMKGPQISTIHYQGHEG 306


>gb|AAX40988.1| RAD51B [Arabidopsis thaliana]
          Length = 338

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   LIKIAKSSISPSVGFFFNITSSGISLLNDDEVEMLGPEANTIHCQGHSGIINYDSE 170
           +IK+AKS +SP + F F+ITS+GISLL+D+  E+ GP  NTIH +GHS +IN+  +
Sbjct: 281 IIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHSDMINFHGD 336


>ref|NP_001031438.1| DNA repair protein RAD51-like 2 [Arabidopsis thaliana]
           gi|83305358|sp|Q9SK02.2|RA51B_ARATH RecName: Full=DNA
           repair protein RAD51 homolog 2; Short=AtRAD51B
           gi|58430738|dbj|BAD89163.1| AtRAD51Balpha [Arabidopsis
           thaliana] gi|330253047|gb|AEC08141.1| DNA repair protein
           RAD51-like 2 [Arabidopsis thaliana]
          Length = 370

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   LIKIAKSSISPSVGFFFNITSSGISLLNDDEVEMLGPEANTIHCQGHSGIINYDSE 170
           +IK+AKS +SP + F F+ITS+GISLL+D+  E+ GP  NTIH +GHS +IN+  +
Sbjct: 313 IIKVAKSPMSPPLAFPFHITSAGISLLSDNGTELKGPGINTIHARGHSDMINFHGD 368


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