BLASTX nr result

ID: Scutellaria22_contig00026266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026266
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...   140   1e-31
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   132   2e-29
emb|CBI23791.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/105 (64%), Positives = 80/105 (76%)
 Frame = -2

Query: 315 KDSEVRPNWVTIMSVLPACGHSSELERGRRIHSLAREKGFDSHPSVQTALVGMYAKCGSL 136
           +DS VRPNWVTIMSVLPAC   S LERGR+IH LA   G +S+ SV  AL  MYAKCGSL
Sbjct: 260 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 319

Query: 135 ADAKWCFDRLNPSSRNLVAWNSMITAYTSNGLGMEAVRTFESMIQ 1
            DA+ CFD+LN + +NL+AWN+MITAY S G G++AV TF  MIQ
Sbjct: 320 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQ 364


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/105 (64%), Positives = 80/105 (76%)
 Frame = -2

Query: 315 KDSEVRPNWVTIMSVLPACGHSSELERGRRIHSLAREKGFDSHPSVQTALVGMYAKCGSL 136
           +DS VRPNWVTIMSVLPAC   S LERGR+IH LA   G +S+ SV  AL  MYAKCGSL
Sbjct: 297 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 356

Query: 135 ADAKWCFDRLNPSSRNLVAWNSMITAYTSNGLGMEAVRTFESMIQ 1
            DA+ CFD+LN + +NL+AWN+MITAY S G G++AV TF  MIQ
Sbjct: 357 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQ 401


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/103 (60%), Positives = 79/103 (76%)
 Frame = -2

Query: 309 SEVRPNWVTIMSVLPACGHSSELERGRRIHSLAREKGFDSHPSVQTALVGMYAKCGSLAD 130
           SE++PNWVTI+SVLPAC  S+ LERGRRIH  A   G   + SVQTAL GMYAKC SL +
Sbjct: 309 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVE 368

Query: 129 AKWCFDRLNPSSRNLVAWNSMITAYTSNGLGMEAVRTFESMIQ 1
           A+ CFD +  + +NL+AWN+MITAY S+G G+EAV  FE+M++
Sbjct: 369 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 411


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  132 bits (333), Expect = 2e-29
 Identities = 62/103 (60%), Positives = 79/103 (76%)
 Frame = -2

Query: 309 SEVRPNWVTIMSVLPACGHSSELERGRRIHSLAREKGFDSHPSVQTALVGMYAKCGSLAD 130
           SE++PNWVTI+SVLPAC  S+ LERGRRIH  A   G   + SVQTAL GMYAKC SL +
Sbjct: 235 SEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVE 294

Query: 129 AKWCFDRLNPSSRNLVAWNSMITAYTSNGLGMEAVRTFESMIQ 1
           A+ CFD +  + +NL+AWN+MITAY S+G G+EAV  FE+M++
Sbjct: 295 ARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 337


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/102 (44%), Positives = 69/102 (67%)
 Frame = -2

Query: 312 DSEVRPNWVTIMSVLPACGHSSELERGRRIHSLAREKGFDSHPSVQTALVGMYAKCGSLA 133
           +++VRPN VT+++VL ACG +  LE GR +HS     G   +  V T+L+ MY+KCGSL 
Sbjct: 65  NAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLE 124

Query: 132 DAKWCFDRLNPSSRNLVAWNSMITAYTSNGLGMEAVRTFESM 7
           DA+  F+R+  S++++VAWNSM+  Y  +G   +A+R F+ M
Sbjct: 125 DARLVFERI--SNKDVVAWNSMVVGYAMHGFSQDALRLFKEM 164


Top