BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026205
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...   115   3e-24
ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago t...   112   4e-23

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/152 (47%), Positives = 109/152 (71%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           VE+G  ++EEM+  +++PS+V+YSS+  G  K  L + SL++FR +G  GY YD+  Y+I
Sbjct: 376 VEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSI 435

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           LI GFC QG ++SA +L+EEM+ NNLAP+  +++SL+ G CK+G +  AL FF+ M EGG
Sbjct: 436 LIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGG 495

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
           + P +  CN +I  +C EGRV+EAL  ++EM+
Sbjct: 496 ILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/156 (31%), Positives = 81/156 (51%)
 Frame = +3

Query: 30   KPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKH 209
            K  K E+  ++   M   ++ PS+V YS+++ GF+K     ++L L+ ++   G   D  
Sbjct: 547  KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606

Query: 210  VYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSM 389
             Y ILI   C + +M  A  L ++M  N + P+ +SY S+I G C+IG   KA   F+ M
Sbjct: 607  AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666

Query: 390  TEGGVRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
             + G  P +     ++  YC   R+D A + I EM+
Sbjct: 667  LQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMK 702



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
 Frame = +3

Query: 27  EKPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRK-IGTNGYGYD 203
           E      Q  ++LEEME +   P++VTYS+ + G  + G +  +L+  R  I  NG   +
Sbjct: 266 EADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGL-VN 324

Query: 204 KHVYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFD 383
            + YN +I G C +G+++ A ++LEEM    ++P+  +Y  LI G CK G   K L   +
Sbjct: 325 VYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIE 384

Query: 384 SMTEGGVRPDLYLCNHMIHRYCNEGRVDEAL 476
            M    + P L   + + H  C +   D +L
Sbjct: 385 EMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
 Frame = +3

Query: 60  VLEEMENHDIKPSIVTYSSILKGFSKCGL------MNRSLELFRKIGTNGYGYDKHVYNI 221
           + EEM++    P++ TY+ ++  + K           ++ E+  ++  NG       Y+ 
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
            I G C  G + SA + +  +I  N   N   Y ++I GLCK G   +AL   + M   G
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
           + PD+Y  + +IH +C +G V++ L  I EM+
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/137 (32%), Positives = 66/137 (48%)
 Frame = +3

Query: 87   IKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGKMNSAS 266
            + P +V Y+ ++        M  +  LF+K+  NG   DK  Y  +I GFC  G M  A 
Sbjct: 601  VTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAW 660

Query: 267  ELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNHMIHRY 446
             L  EM+     P  V+Y SL+ G CK+     A    D M   G+ PD+   N +I  +
Sbjct: 661  ALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAH 720

Query: 447  CNEGRVDEALLFIHEMR 497
               G +D+AL  ++EM+
Sbjct: 721  RRRGNLDKALEMLNEMK 737



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/151 (26%), Positives = 72/151 (47%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           ++   K++EEM  +++ P    + S++ GF K GL   +LE F  +   G        N+
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           +I   C +G++  A  L+ EM    + PN  +Y ++I  LCK     +AL  F  M +  
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
           V P + + + +I  +  +    +AL+    M
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARM 596



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/122 (27%), Positives = 64/122 (52%)
 Frame = +3

Query: 48  QGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILI 227
           + + + ++M  + + P  ++Y+S++ GF + G M ++  LF ++   G+      Y  L+
Sbjct: 623 EAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLV 682

Query: 228 TGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVR 407
            G+C   +++ A  L++EM    + P+ V+Y  LI    + G   KAL   + M E GV 
Sbjct: 683 DGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742

Query: 408 PD 413
           PD
Sbjct: 743 PD 744



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/136 (30%), Positives = 64/136 (47%)
 Frame = +3

Query: 87  IKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGKMNSAS 266
           I PSI T + I+    + G +  +L L  ++ T G   +   YN +I   C + K   A 
Sbjct: 496 ILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERAL 555

Query: 267 ELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNHMIHRY 446
           EL   M+  N+ P+ V Y +LI G  K     KAL  +  M + GV PD+     +I+  
Sbjct: 556 ELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615

Query: 447 CNEGRVDEALLFIHEM 494
           C+  R+ EA     +M
Sbjct: 616 CHRSRMCEAYNLFKKM 631


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/146 (42%), Positives = 90/146 (61%)
 Frame = +3

Query: 60  VLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFC 239
           ++EEME+  IKPSIV+Y+S++ G  K  ++  ++++F  IG +   YD  VY  LI GFC
Sbjct: 448 LMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFC 507

Query: 240 AQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLY 419
            QG M+SA +LLEEMI N L P   S +SLI G  K+G F +AL  F++M   G+ PD  
Sbjct: 508 MQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTI 567

Query: 420 LCNHMIHRYCNEGRVDEALLFIHEMR 497
            CN+++   C  G   EAL  + + +
Sbjct: 568 ACNYILDGSCRAGYFKEALTLLEDFQ 593



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/151 (27%), Positives = 74/151 (49%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           + Q   +L ++     KP++VTYS+ + G  K G +  +L L R +       + H +N 
Sbjct: 337 MRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFND 396

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           +I GFC +G++  A ++LEEM  + + P+  SY  LI   C  G   K L+  + M    
Sbjct: 397 VIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
           ++P +     +IH  C +  +  A+   H +
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/130 (30%), Positives = 73/130 (56%)
 Frame = +3

Query: 105 TYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGKMNSASELLEEM 284
           +++ ++ GF K G +  +L++  ++ ++G   D + Y+ILI  FC +G +    +L+EEM
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452

Query: 285 ILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNHMIHRYCNEGRV 464
             + + P+ VSY SLI GLCK      A++ F S+     + D  +   +I  +C +G +
Sbjct: 453 EHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDM 512

Query: 465 DEALLFIHEM 494
           D A+  + EM
Sbjct: 513 DSAIKLLEEM 522



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/150 (28%), Positives = 76/150 (50%)
 Frame = +3

Query: 45   EQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNIL 224
            E+  ++L  M   ++ PS+V YS+++ GF+K     R++ LF ++   G  ++   Y IL
Sbjct: 618  ERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTIL 677

Query: 225  ITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGV 404
            ++ F    KM+ A  + +EM    L  + +SY +LI+G C      KA   F+ M+  G 
Sbjct: 678  MSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGC 737

Query: 405  RPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
             P++     +I  +C   R+D A     +M
Sbjct: 738  SPNVITYTCIIDGFCKSNRIDLATWVFDKM 767



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 41/151 (27%), Positives = 70/151 (46%)
 Frame = +3

Query: 45   EQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNIL 224
            +Q  +V   M    I P  +  + IL G  + G    +L L      +G+  + H YN +
Sbjct: 548  DQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAI 607

Query: 225  ITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGV 404
            I   C +G    A ELL  M+  N+ P+ V+Y +LI G  K   F +A+N F  M + G+
Sbjct: 608  IYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGI 667

Query: 405  RPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
              ++     ++  + +  ++ EA     EM+
Sbjct: 668  TFNIATYTILMSIFSHSHKMHEAYGIFKEMK 698



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/126 (31%), Positives = 59/126 (46%)
 Frame = +3

Query: 96   SIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGKMNSASELL 275
            +I TY+ ++  FS    M+ +  +F+++   G   D+  Y  LI GFC   +M  A  L 
Sbjct: 670  NIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALF 729

Query: 276  EEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNHMIHRYCNE 455
            EEM     +PN ++Y  +I G CK      A   FD M    V PD+     +I  Y   
Sbjct: 730  EEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKH 789

Query: 456  GRVDEA 473
            G  D+A
Sbjct: 790  GYFDQA 795



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
 Frame = +3

Query: 9   FIKPHLEKPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGF-SKCGL---MNRSLELFRK 176
           F+   L +  +VE   +V EE+++    P+I TY+ ++  + S  G    M ++  +  K
Sbjct: 287 FLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGK 346

Query: 177 IGTNGYGYDKHVYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGP 356
           I  +G       Y+  I G C  G + +A  L+  +   N   N  S+  +I G CK G 
Sbjct: 347 IYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGE 406

Query: 357 FGKALNFFDSMTEGGVRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
             +AL   + M   G+ PD+Y  + +I+ +C +G V + L  + EM
Sbjct: 407 VFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/140 (27%), Positives = 69/140 (49%)
 Frame = +3

Query: 57  KVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGF 236
           K+LEEM  +++ P+  +  S+++G+ K GL +++LE+F  +  +G   D    N ++ G 
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 237 CAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDL 416
           C  G    A  LLE+   +    N  SY ++I  LCK G   +AL     M +  V P +
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSV 636

Query: 417 YLCNHMIHRYCNEGRVDEAL 476
              + +I  +  +     A+
Sbjct: 637 VNYSTLISGFAKQSNFKRAV 656



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/125 (25%), Positives = 66/125 (52%)
 Frame = +3

Query: 39   KVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYN 218
            K+ + + + +EM+   +    ++Y++++ GF     M ++  LF ++   G   +   Y 
Sbjct: 686  KMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYT 745

Query: 219  ILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEG 398
             +I GFC   +++ A+ + ++M  +++ P+ V+Y  LI    K G F +A   +D M + 
Sbjct: 746  CIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDK 805

Query: 399  GVRPD 413
            GV PD
Sbjct: 806  GVLPD 810


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/152 (37%), Positives = 94/152 (61%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           +E G  +++EME+ + KP +V  +S+L G    GL+N  L  F ++   GY +D   Y+ 
Sbjct: 311 IESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYST 370

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           LI GF     + SA+ L+ EM  N L P+Y+ Y SLI   C+ G   +AL  F +M + G
Sbjct: 371 LIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG 430

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
           ++PD+  CNH++ +YC+ G+ +EAL++I++M+
Sbjct: 431 LQPDIITCNHIVDQYCSRGQFEEALIYINQMK 462



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/151 (29%), Positives = 74/151 (49%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           +EQ   +LEEME     P++VTY   + G  + G +  +    + + ++    + + YN 
Sbjct: 206 MEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNA 265

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           LI GFC +G+ + A +LLEEM    ++P+  SY  L+   C  G     +N    M    
Sbjct: 266 LIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCN 325

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
            +P L  C  ++     +G V++ L F HE+
Sbjct: 326 KKPPLVCCTSVLMGLRTKGLVNDCLNFFHEL 356



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/150 (29%), Positives = 72/150 (48%)
 Frame = +3

Query: 48  QGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILI 227
           + WK+  +M     KP  VT + ++  FSK G M+++L LF+++   G   D+  +  +I
Sbjct: 524 KAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAII 583

Query: 228 TGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVR 407
            G+C  G +  A  + ++M  NN+ PN  +Y  L+ G CK+     A    D M    V 
Sbjct: 584 DGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVT 643

Query: 408 PDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
           PD+     +I  Y     +D A     EM+
Sbjct: 644 PDVKTYTALIAGYQRIENIDRAYEVFDEMK 673



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/152 (28%), Positives = 79/152 (51%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           +E  W  ++++ + +   +I  Y+++++GF + G  + +L+L  ++   G   D + Y+I
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGG 401
           L+  FC +G + S   L++EM   N  P  V   S+++GL   G     LNFF  ++  G
Sbjct: 301 LVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKG 360

Query: 402 VRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
            + DL   + +IH +     V  A   +HEMR
Sbjct: 361 YKHDLISYSTLIHGFLKGHNVKSANNLVHEMR 392



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
 Frame = +3

Query: 87  IKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGK----- 251
           ++ +I + + +LK  ++   +     LF  +  +G   + + Y I+I  +C +       
Sbjct: 146 VELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNID 205

Query: 252 MNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNH 431
           M  AS +LEEM      P  V+Y   I GLC++G    A N    +       ++Y  N 
Sbjct: 206 MEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNA 265

Query: 432 MIHRYCNEGRVDEALLFIHEMR 497
           +I  +C +GR DEAL  + EM+
Sbjct: 266 LIQGFCQKGRPDEALKLLEEMK 287


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/156 (40%), Positives = 88/156 (56%)
 Frame = +3

Query: 30  KPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKH 209
           K  +VE+   ++EEM   ++KPS+VTYSS+  G  K GL   SL +F  +G  GY +D  
Sbjct: 370 KKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVI 429

Query: 210 VYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSM 389
            YN LI GF  Q  M SA +L+ EM +N   PN  ++  LI G CK     KAL  F  M
Sbjct: 430 SYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIM 489

Query: 390 TEGGVRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
            + GV+ +++ CN M   +  EG   EAL  I+E++
Sbjct: 490 LKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQ 525



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/162 (30%), Positives = 82/162 (50%)
 Frame = +3

Query: 9   FIKPHLEKPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTN 188
           + K    K   + +  +VLEEME +   P++VTY + + G  + G +  +L L R +   
Sbjct: 258 YCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIR 317

Query: 189 GYGYDKHVYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKA 368
               + + YN +I  FC  G+++ A ELLE+M  + ++P   SY  LI GLCK G   KA
Sbjct: 318 NQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKA 377

Query: 369 LNFFDSMTEGGVRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
           L+  + M +  V+P L   + +    C  G  + +L   H +
Sbjct: 378 LDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNL 419



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/156 (27%), Positives = 79/156 (50%)
 Frame = +3

Query: 30   KPFKVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKH 209
            K  K E+ W+VL  M  +++ P  + Y++++ G++K     ++L L+ K+   G      
Sbjct: 545  KEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIV 604

Query: 210  VYNILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSM 389
             Y +LI  F  + KM  A  L +EMI   L P+ + +  +I G CK+G    A   ++ M
Sbjct: 605  TYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664

Query: 390  TEGGVRPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
            ++ G  P++     +I  Y    R+D+A    ++M+
Sbjct: 665  SQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMK 700



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/137 (35%), Positives = 66/137 (48%)
 Frame = +3

Query: 87   IKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFCAQGKMNSAS 266
            I PSIVTY+ ++  FS    M  +  LF+++   G   D+ ++  +I GFC  G M SA 
Sbjct: 599  IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAW 658

Query: 267  ELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLYLCNHMIHRY 446
             L EEM     +PN V+Y  LI G  KI    KA   F+ M    V PD      +I  Y
Sbjct: 659  ALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGY 718

Query: 447  CNEGRVDEALLFIHEMR 497
             + G  D      +EM+
Sbjct: 719  QSLGYSDRVREMFNEMK 735



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/152 (25%), Positives = 73/152 (48%)
 Frame = +3

Query: 39  KVEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYN 218
           ++++  +V   M    ++ +I T + +   F++ G    +L+L  ++   G   + + YN
Sbjct: 478 RLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYN 537

Query: 219 ILITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEG 398
           I+I   C + K   A E+L  M+ NN+ P  + Y +LI G  K     KAL  +  M + 
Sbjct: 538 IVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKV 597

Query: 399 GVRPDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
           G+ P +     +I+ + N  ++ EA     EM
Sbjct: 598 GIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
 Frame = +3

Query: 60  VLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNILITGFC 239
           V  +     ++ +I++ + +L  F++         LF ++  +G   +   Y I++  +C
Sbjct: 200 VFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYC 259

Query: 240 --AQGK---MNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGV 404
             + GK   +  A+E+LEEM +N  +P  V+Y + I GLC+ G    AL     +     
Sbjct: 260 KGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQ 319

Query: 405 RPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
             + Y  N +IH +C  G + EA   + +MR
Sbjct: 320 PLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/100 (31%), Positives = 52/100 (52%)
 Frame = +3

Query: 42  VEQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNI 221
           ++  W + EEM      P++VTY+ ++ G+ K   M+++  LF K+  +    D   Y  
Sbjct: 654 MKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTA 713

Query: 222 LITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGL 341
           LI G+ + G  +   E+  EM  N + PNY +Y +L L L
Sbjct: 714 LIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHL 753


>ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355517534|gb|AES99157.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 872

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/146 (41%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
 Frame = +3

Query: 66  EEMENHDIKPSIVTYSSILKGFSKCGLMNRSLEL--FRKIGTNGYGYDKHVYNILITGFC 239
           E+M+ + IKPSIV ++SI+    K   M   + +  FR IG +G  YD+ +Y  L+ GFC
Sbjct: 450 EDMKLNQIKPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCKYDQTIYETLVDGFC 509

Query: 240 AQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGVRPDLY 419
            +G M SA +LLEEM  NN AP+   Y S I G  K+  F  AL  +  M + G+RPD  
Sbjct: 510 REGDMVSAGKLLEEMGSNNFAPSAFCYCSQIKGFYKLRQFANALKVYSIMQKRGIRPDTI 569

Query: 420 LCNHMIHRYCNEGRVDEALLFIHEMR 497
            CNH++  YC +   +EAL    E R
Sbjct: 570 ACNHILSIYCRKREFNEALALSEEFR 595



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
 Frame = +3

Query: 93  PSIVTYSSILKGFSKCGLM-------------NRSLELFRKIGTNGYGYDKHVYNILITG 233
           P++VTYS+ +KG  K G +             + + ++  ++ + G   D + Y+ILI  
Sbjct: 376 PNVVTYSTYIKGLCKAGSLRVVWKLICNMCELDEASQVLEEMKSIGILPDVYGYSILIDA 435

Query: 234 FCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLC--KIGPFGKALNFFDSMTEGGVR 407
           FC  G      +L E+M LN + P+ V++ S+I  LC  K  P    +N F ++   G +
Sbjct: 436 FCKNGDDKKVVDLREDMKLNQIKPSIVNHTSIIHRLCKSKTMPMQIVMNKFRAIGASGCK 495

Query: 408 PDLYLCNHMIHRYCNEGRVDEALLFIHEM 494
            D  +   ++  +C EG +  A   + EM
Sbjct: 496 YDQTIYETLVDGFCREGDMVSAGKLLEEM 524



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/151 (25%), Positives = 73/151 (48%)
 Frame = +3

Query: 45   EQGWKVLEEMENHDIKPSIVTYSSILKGFSKCGLMNRSLELFRKIGTNGYGYDKHVYNIL 224
            E+  ++L  M   ++ P +V YS+++  F+K     ++++LF ++   G  ++   +  L
Sbjct: 620  EKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIKTHTAL 679

Query: 225  ITGFCAQGKMNSASELLEEMILNNLAPNYVSYKSLILGLCKIGPFGKALNFFDSMTEGGV 404
            I       K++ A +L E+M    + P+ ++Y +LI   C  G    A   FD M + G 
Sbjct: 680  IDLCIRNCKIDKACDLFEDMEKRGVHPDQITYNTLIAAFCNTGEMIIAKTLFDRMLQEGC 739

Query: 405  RPDLYLCNHMIHRYCNEGRVDEALLFIHEMR 497
             P++   +  I+ Y      D+A  +  EMR
Sbjct: 740  SPNVVTYSCFINAYWKLDMRDQAHKWYDEMR 770