BLASTX nr result

ID: Scutellaria22_contig00026167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026167
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...    91   1e-16
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...    88   6e-16
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...    87   1e-15
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...    84   9e-15
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...    84   2e-14

>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
 Frame = -2

Query: 247 MGQSASTSR---------PRSAKSAAVISPPTTEPGSDEDLDDAITGN---DYTLNLPDE 104
           MGQS+S++             +KS A+ISP  TE  +D+D D  +  N   DY  +LPDE
Sbjct: 1   MGQSSSSTAILTRRESIYRSKSKSTALISPMQTEEPNDKD-DVVLIINESPDYISDLPDE 59

Query: 103 CLACVFQSLSSGDRKRSSLVCRRWLRVEGQSRHR 2
           CLAC+FQSLS  DR+R SLVCRRWLR+EGQSRHR
Sbjct: 60  CLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHR 93


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/94 (47%), Positives = 58/94 (61%), Gaps = 12/94 (12%)
 Frame = -2

Query: 247 MGQSASTS------------RPRSAKSAAVISPPTTEPGSDEDLDDAITGNDYTLNLPDE 104
           MGQSASTS             P  ++S +++  P+ +   +          DY  +LPDE
Sbjct: 1   MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE 60

Query: 103 CLACVFQSLSSGDRKRSSLVCRRWLRVEGQSRHR 2
           CLAC+FQSL SGDRK+ SLVCRRWLR+EGQ+RHR
Sbjct: 61  CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHR 94


>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
           gi|222835491|gb|EEE73926.1| f-box family protein
           [Populus trichocarpa]
          Length = 534

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/92 (52%), Positives = 58/92 (63%), Gaps = 10/92 (10%)
 Frame = -2

Query: 247 MGQSASTS---------RPRSAKSAAVISPPTTEPGSDEDLDDAIT-GNDYTLNLPDECL 98
           MGQSAST+         R  S +S +  + P      +E  +     G DY  +LPDECL
Sbjct: 1   MGQSASTALITSRRDSNRSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPDECL 60

Query: 97  ACVFQSLSSGDRKRSSLVCRRWLRVEGQSRHR 2
           AC+FQSL+SGDRK  SLVCRRWLR+EGQSRHR
Sbjct: 61  ACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHR 92


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 12/94 (12%)
 Frame = -2

Query: 247 MGQSAST-----------SRPRSAKSAAVISPPTTEPGSDEDLDDAITG-NDYTLNLPDE 104
           MGQSAS+           S     KS A+ISP   +    +D+ + I G +D+  +LPDE
Sbjct: 1   MGQSASSAAILSRRDSNHSHRSKIKSTALISPMHLD--ETDDVQEIIHGASDFISDLPDE 58

Query: 103 CLACVFQSLSSGDRKRSSLVCRRWLRVEGQSRHR 2
           CLAC+FQSLSS DRK  SLVCRRW +VEGQSRHR
Sbjct: 59  CLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHR 92


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/94 (51%), Positives = 57/94 (60%), Gaps = 12/94 (12%)
 Frame = -2

Query: 247 MGQSAST------------SRPRSAKSAAVISPPTTEPGSDEDLDDAITGNDYTLNLPDE 104
           MGQ+ ST            S+   +K    I P   E  ++  L +A    DY  +LPDE
Sbjct: 1   MGQTTSTALITSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEA---PDYISDLPDE 57

Query: 103 CLACVFQSLSSGDRKRSSLVCRRWLRVEGQSRHR 2
           CLAC+FQSLSSGDRK  SLVCRRWLR+EGQSRHR
Sbjct: 58  CLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHR 91


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