BLASTX nr result

ID: Scutellaria22_contig00026122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00026122
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   240   2e-61
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              240   2e-61
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   226   2e-57
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   219   3e-55
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   219   3e-55

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  240 bits (612), Expect = 2e-61
 Identities = 120/199 (60%), Positives = 157/199 (78%)
 Frame = -1

Query: 597  SSWERFLILQNTSGSCIVRSSAVGFTDSLGHFDFAVMYETSKNTLTDAIQLQLVSSLRLS 418
            S WERFLILQN S  CIVR++ +GF  ++     A + E+S+N LTDA++LQLVSSLR++
Sbjct: 980  SGWERFLILQNESRLCIVRATVIGFAGTVSGHVSAPLLESSENVLTDAVRLQLVSSLRVT 1039

Query: 417  PEFGLLFFSSEARLNISITGGSCFLDTVVNNTQIVEVIRQIPAHGCSQLMLAPKSLGTAL 238
            PEF LLFF+S+A+ N+SITGGSCFLD VVN++++V+VI+  P   C QL++APK LGTAL
Sbjct: 1040 PEFKLLFFNSDAKANLSITGGSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTAL 1099

Query: 237  VTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSFQSINFSVGVADGRTFDPSQ 58
            VTV+DIGL P L+ASS VQV ++DWI+I +GE IS+ EGS QSI    GV DG TFD SQ
Sbjct: 1100 VTVYDIGLAPHLSASSVVQVADVDWIRITSGEEISLMEGSVQSIIVMAGVDDGSTFDASQ 1159

Query: 57   YKYMNIRVHVEENIVKVVE 1
            Y YMNI+VH+E++IV +V+
Sbjct: 1160 YVYMNIQVHIEDHIVDLVD 1178


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  240 bits (612), Expect = 2e-61
 Identities = 120/199 (60%), Positives = 157/199 (78%)
 Frame = -1

Query: 597  SSWERFLILQNTSGSCIVRSSAVGFTDSLGHFDFAVMYETSKNTLTDAIQLQLVSSLRLS 418
            S WERFLILQN S  CIVR++ +GF  ++     A + E+S+N LTDA++LQLVSSLR++
Sbjct: 905  SGWERFLILQNESRLCIVRATVIGFAGTVSGHVSAPLLESSENVLTDAVRLQLVSSLRVT 964

Query: 417  PEFGLLFFSSEARLNISITGGSCFLDTVVNNTQIVEVIRQIPAHGCSQLMLAPKSLGTAL 238
            PEF LLFF+S+A+ N+SITGGSCFLD VVN++++V+VI+  P   C QL++APK LGTAL
Sbjct: 965  PEFKLLFFNSDAKANLSITGGSCFLDAVVNDSRVVDVIQPPPGLQCLQLIVAPKGLGTAL 1024

Query: 237  VTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSFQSINFSVGVADGRTFDPSQ 58
            VTV+DIGL P L+ASS VQV ++DWI+I +GE IS+ EGS QSI    GV DG TFD SQ
Sbjct: 1025 VTVYDIGLAPHLSASSVVQVADVDWIRITSGEEISLMEGSVQSIIVMAGVDDGSTFDASQ 1084

Query: 57   YKYMNIRVHVEENIVKVVE 1
            Y YMNI+VH+E++IV +V+
Sbjct: 1085 YVYMNIQVHIEDHIVDLVD 1103


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  226 bits (577), Expect = 2e-57
 Identities = 113/197 (57%), Positives = 146/197 (74%)
 Frame = -1

Query: 597  SSWERFLILQNTSGSCIVRSSAVGFTDSLGHFDFAVMYETSKNTLTDAIQLQLVSSLRLS 418
            SSWERFLILQN SG C+VR+S +GF        F+    T +  LTDAI LQ+VS+LR+ 
Sbjct: 901  SSWERFLILQNESGECLVRASVIGFASH-----FSAKLPTLEMVLTDAIHLQIVSTLRVD 955

Query: 417  PEFGLLFFSSEARLNISITGGSCFLDTVVNNTQIVEVIRQIPAHGCSQLMLAPKSLGTAL 238
            PEF LLFF+   + N+SITGGSCFL+  VN+  +VEVI+  P   CSQL L+PK LGTA+
Sbjct: 956  PEFILLFFNPNTKANLSITGGSCFLEAAVNDPNVVEVIQSPPGLQCSQLTLSPKGLGTAV 1015

Query: 237  VTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSFQSINFSVGVADGRTFDPSQ 58
            VTV+DIGL P +AAS+ VQV E+DWIKI+TG+ IS+ EG   S++   G++DGRTFDPSQ
Sbjct: 1016 VTVYDIGLAPIVAASAVVQVAEVDWIKIVTGQEISLMEGQIASMDLVAGISDGRTFDPSQ 1075

Query: 57   YKYMNIRVHVEENIVKV 7
            YKYM I V +E++IV++
Sbjct: 1076 YKYMEIHVWIEDDIVEL 1092


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
            sativus]
          Length = 1758

 Score =  219 bits (558), Expect = 3e-55
 Identities = 110/198 (55%), Positives = 148/198 (74%)
 Frame = -1

Query: 594  SWERFLILQNTSGSCIVRSSAVGFTDSLGHFDFAVMYETSKNTLTDAIQLQLVSSLRLSP 415
            SWERFLILQN SG CIVR++  GF+D++     A   + S N LTDA +LQLVS+LR+ P
Sbjct: 889  SWERFLILQNESGECIVRATVTGFSDAVRDDYSAHWLDNSDNLLTDATRLQLVSTLRVHP 948

Query: 414  EFGLLFFSSEARLNISITGGSCFLDTVVNNTQIVEVIRQIPAHGCSQLMLAPKSLGTALV 235
            EF LLFF+ + + N+ ITGGSCFLD VVN+++IVEVI   P   C +L L+PK LGTALV
Sbjct: 949  EFTLLFFNPDLKANMLITGGSCFLDAVVNDSRIVEVIPPTPGMQCLELALSPKGLGTALV 1008

Query: 234  TVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSFQSINFSVGVADGRTFDPSQY 55
            TV+DIGL PPL++S+ V V ++DWIKI + E IS+ E S Q ++ + G++DG TFD SQ+
Sbjct: 1009 TVYDIGLNPPLSSSAVVHVADVDWIKISSQEEISLLEESSQVVDLAAGISDGSTFDSSQF 1068

Query: 54   KYMNIRVHVEENIVKVVE 1
             YM+I VH+E+ IV++V+
Sbjct: 1069 AYMHILVHIEDQIVELVD 1086


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  219 bits (558), Expect = 3e-55
 Identities = 110/198 (55%), Positives = 148/198 (74%)
 Frame = -1

Query: 594  SWERFLILQNTSGSCIVRSSAVGFTDSLGHFDFAVMYETSKNTLTDAIQLQLVSSLRLSP 415
            SWERFLILQN SG CIVR++  GF+D++     A   + S N LTDA +LQLVS+LR+ P
Sbjct: 889  SWERFLILQNESGECIVRATVTGFSDAVRDDYSAHWLDNSDNLLTDATRLQLVSTLRVHP 948

Query: 414  EFGLLFFSSEARLNISITGGSCFLDTVVNNTQIVEVIRQIPAHGCSQLMLAPKSLGTALV 235
            EF LLFF+ + + N+ ITGGSCFLD VVN+++IVEVI   P   C +L L+PK LGTALV
Sbjct: 949  EFTLLFFNPDLKANMLITGGSCFLDAVVNDSRIVEVIPPTPGMQCLELALSPKGLGTALV 1008

Query: 234  TVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSFQSINFSVGVADGRTFDPSQY 55
            TV+DIGL PPL++S+ V V ++DWIKI + E IS+ E S Q ++ + G++DG TFD SQ+
Sbjct: 1009 TVYDIGLNPPLSSSAVVHVADVDWIKISSQEEISLLEESSQVVDLAAGISDGSTFDSSQF 1068

Query: 54   KYMNIRVHVEENIVKVVE 1
             YM+I VH+E+ IV++V+
Sbjct: 1069 AYMHILVHIEDQIVELVD 1086


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