BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025870
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [...   431   e-130
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   432   e-130
ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [...   437   e-130
ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [...   437   e-129
ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   431   e-128

>ref|XP_003556222.1| PREDICTED: RNA pseudourine synthase 5-like [Glycine max]
          Length = 371

 Score =  431 bits (1109), Expect(2) = e-130
 Identities = 205/314 (65%), Positives = 261/314 (83%), Gaps = 1/314 (0%)
 Frame = +1

Query: 124  RRIRNKQITIDGRVVTDADAVIREGEELVYHRLPWKEPDAPFFLEIMYEDNDVIALNKPS 303
            +RI++ QIT+DG VVTD++ V+R G +L+YHRLPWKEPDAP  ++++YED+D+IALNKPS
Sbjct: 52   QRIKSGQITVDGGVVTDSNTVLRVGSKLIYHRLPWKEPDAPHMIDVLYEDDDMIALNKPS 111

Query: 304  GLQVLPGGLFQQRTVLTQLQRHVDTLVASGCQES-HPVPVHRLGRGTSGILLCAKTKLGK 480
            GLQVLPGGL+QQRT+LTQLQ   +        +  HPVPVHRLGRGTSGILLCAKTKL +
Sbjct: 112  GLQVLPGGLYQQRTILTQLQWEANNQGTCEMHKRLHPVPVHRLGRGTSGILLCAKTKLAR 171

Query: 481  SRLAALFADGTSIVGASRNKDPQQKAARNITKLYRALASGVIIDDEVVIDQPIGLIKYPG 660
            +RLA+ FADGTS VG  R  D +Q+  + I K+YRAL SG++ +D+V I+QPIG++KYPG
Sbjct: 172  ARLASHFADGTSHVGGKR--DTKQELGK-IAKMYRALVSGIVENDKVTINQPIGIVKYPG 228

Query: 661  VAQGLYVASSSGKPALSKVLVLERNMRSNSTLIQVEIKSGRPHQIRIHLSFIGHPLIGDP 840
            VA+GLYVAS SGKPALS V +LE N++ NSTL+QV+I+SGRPHQIRIHLSFIGHPL+GDP
Sbjct: 229  VAKGLYVASESGKPALSVVDILETNIQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDP 288

Query: 841  LYGTGGQPKCSNLEIVDQNFAQDGGYERPERPVPGDCGYHLHAHRVVFPHPVTNEILDIT 1020
            LYG GGQPKC + + VD++FA+DGGY+RP +PVPGDCGY+LHAH++V  HP TNE+++I 
Sbjct: 289  LYGVGGQPKCLDCDFVDESFAEDGGYQRPTKPVPGDCGYYLHAHKLVLSHPTTNELIEII 348

Query: 1021 APLPPILQTMEESE 1062
            APLP  L T EE++
Sbjct: 349  APLPSALHTAEEAK 362



 Score = 62.0 bits (149), Expect(2) = e-130
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +2

Query: 8   PWPELNAGIYYRDLIRRSDAGATLIEYYTRKYENSAPLHG 127
           PWPE N G+ Y D++R SDAGATLIE+Y+ KY++SAPL G
Sbjct: 10  PWPECNDGLSYDDVVRASDAGATLIEFYSTKYKSSAPLQG 49


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
            gi|358349060|ref|XP_003638558.1| RNA pseudourine synthase
            [Medicago truncatula] gi|355481000|gb|AES62203.1| RNA
            pseudourine synthase [Medicago truncatula]
            gi|355504493|gb|AES85696.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 371

 Score =  432 bits (1111), Expect(2) = e-130
 Identities = 209/317 (65%), Positives = 258/317 (81%), Gaps = 2/317 (0%)
 Frame = +1

Query: 124  RRIRNKQITIDGRVVTDADAVIREGEELVYHRLPWKEPDAPFFLEIMYEDNDVIALNKPS 303
            +RI++ QIT+D RVVTD + ++R G +LVYHR+PWKEPDAP  +E++YED+D+IALNKPS
Sbjct: 52   QRIKSDQITLDARVVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPS 111

Query: 304  GLQVLPGGLFQQRTVLTQLQRHVDTL-VASGCQESHPVPVHRLGRGTSGILLCAKTKLGK 480
            GLQVLPGGLFQQRTVLTQLQ   +        Q+ HPVPVHRLGRGTSGILLCAKTKL +
Sbjct: 112  GLQVLPGGLFQQRTVLTQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLAR 171

Query: 481  SRLAALFADGTSIVGASRNKDPQQKAARNITKLYRALASGVIIDDEVVIDQPIGLIKYPG 660
            +RLA+ FADGTS +     K    +    I K+YRAL SG+I +D+V I+QPIG++KYPG
Sbjct: 172  ARLASYFADGTSRI---EGKGHTNQELGKIAKIYRALVSGIINNDQVTINQPIGMVKYPG 228

Query: 661  VAQGLYVASSSGKPALSKVLVLERNMRSNSTLIQV-EIKSGRPHQIRIHLSFIGHPLIGD 837
            VA+GLYVAS SGKPALS V VLERN++ NSTL+QV +I+SGRPHQIRIHLSFIGHPL+GD
Sbjct: 229  VAKGLYVASQSGKPALSVVHVLERNVKENSTLVQVVKIQSGRPHQIRIHLSFIGHPLLGD 288

Query: 838  PLYGTGGQPKCSNLEIVDQNFAQDGGYERPERPVPGDCGYHLHAHRVVFPHPVTNEILDI 1017
            PLY  GGQPKC + + +D++FA+DGGY RP +PVPGDCGYHLHAHR+   HP+TNEI+++
Sbjct: 289  PLYAVGGQPKCLDCDFLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEM 348

Query: 1018 TAPLPPILQTMEESEAK 1068
             APLP ILQT EE+ A+
Sbjct: 349  IAPLPSILQTHEEAIAQ 365



 Score = 60.1 bits (144), Expect(2) = e-130
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 8   PWPELNAGIYYRDLIRRSDAGATLIEYYTRKYENSAPLHG 127
           PWPE N G+ Y D++R SDAG TLIE+Y+ KY++SAPL G
Sbjct: 10  PWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQG 49


>ref|XP_004143830.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  437 bits (1124), Expect(2) = e-130
 Identities = 209/313 (66%), Positives = 257/313 (82%)
 Frame = +1

Query: 124  RRIRNKQITIDGRVVTDADAVIREGEELVYHRLPWKEPDAPFFLEIMYEDNDVIALNKPS 303
            +RI+N+QITIDG V+TD + ++R G +LVY RLPWKEPD P+ LEI+YEDN++IALNKPS
Sbjct: 55   QRIKNEQITIDGEVITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPS 114

Query: 304  GLQVLPGGLFQQRTVLTQLQRHVDTLVASGCQESHPVPVHRLGRGTSGILLCAKTKLGKS 483
            GLQVLPGG+FQQRTVLTQLQ        S  +E HPVPVHRLGRGTSGILLCAKTKL ++
Sbjct: 115  GLQVLPGGVFQQRTVLTQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLART 174

Query: 484  RLAALFADGTSIVGASRNKDPQQKAARNITKLYRALASGVIIDDEVVIDQPIGLIKYPGV 663
            + AA FA+GTS V  +RN   ++   R I+K+YRAL +G+I DDEV +DQPIG ++YPGV
Sbjct: 175  QFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGV 234

Query: 664  AQGLYVASSSGKPALSKVLVLERNMRSNSTLIQVEIKSGRPHQIRIHLSFIGHPLIGDPL 843
            AQGLYVA+ SGKPA SKV VLER+ +S  TL+QVEI+SGRPHQIRIHLS IGHPL+GDPL
Sbjct: 235  AQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLVGDPL 294

Query: 844  YGTGGQPKCSNLEIVDQNFAQDGGYERPERPVPGDCGYHLHAHRVVFPHPVTNEILDITA 1023
            Y  GGQP C + E+V+Q+FA+DGGYERP +PVPGDCGY+LHAH+++  HP TNE++ I A
Sbjct: 295  YVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIA 354

Query: 1024 PLPPILQTMEESE 1062
            PLPPIL+T  E+E
Sbjct: 355  PLPPILRTRIEAE 367



 Score = 54.7 bits (130), Expect(2) = e-130
 Identities = 20/40 (50%), Positives = 32/40 (80%)
 Frame = +2

Query: 8   PWPELNAGIYYRDLIRRSDAGATLIEYYTRKYENSAPLHG 127
           PWP+LN G++Y D+++  D+G +LI +Y+ KY++SAPL G
Sbjct: 13  PWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEG 52


>ref|XP_004157313.1| PREDICTED: RNA pseudourine synthase 5-like [Cucumis sativus]
          Length = 371

 Score =  437 bits (1123), Expect(2) = e-129
 Identities = 209/313 (66%), Positives = 257/313 (82%)
 Frame = +1

Query: 124  RRIRNKQITIDGRVVTDADAVIREGEELVYHRLPWKEPDAPFFLEIMYEDNDVIALNKPS 303
            +RI+N+QITIDG V+TD + ++R G +LVY RLPWKEPD P+ LEI+YEDN++IALNKPS
Sbjct: 55   QRIKNEQITIDGEVITDPETILRIGSDLVYRRLPWKEPDTPYLLEILYEDNEMIALNKPS 114

Query: 304  GLQVLPGGLFQQRTVLTQLQRHVDTLVASGCQESHPVPVHRLGRGTSGILLCAKTKLGKS 483
            GLQVLPGG+FQQRTVLTQLQ        S  +E HPVPVHRLGRGTSGILLCAKTKL ++
Sbjct: 115  GLQVLPGGVFQQRTVLTQLQWWSSKQSFSVSEELHPVPVHRLGRGTSGILLCAKTKLART 174

Query: 484  RLAALFADGTSIVGASRNKDPQQKAARNITKLYRALASGVIIDDEVVIDQPIGLIKYPGV 663
            + AA FA+GTS V  +RN   ++   R I+K+YRAL +G+I DDEV +DQPIG ++YPGV
Sbjct: 175  QFAAYFAEGTSSVRRNRNSTMEEGTKRKISKIYRALVTGIIHDDEVSVDQPIGRMQYPGV 234

Query: 664  AQGLYVASSSGKPALSKVLVLERNMRSNSTLIQVEIKSGRPHQIRIHLSFIGHPLIGDPL 843
            AQGLYVA+ SGKPA SKV VLER+ +S  TL+QVEI+SGRPHQIRIHLS IGHPL+GDPL
Sbjct: 235  AQGLYVATPSGKPACSKVNVLERDEQSKHTLVQVEIQSGRPHQIRIHLSSIGHPLLGDPL 294

Query: 844  YGTGGQPKCSNLEIVDQNFAQDGGYERPERPVPGDCGYHLHAHRVVFPHPVTNEILDITA 1023
            Y  GGQP C + E+V+Q+FA+DGGYERP +PVPGDCGY+LHAH+++  HP TNE++ I A
Sbjct: 295  YVAGGQPNCLHSEVVNQSFAEDGGYERPTKPVPGDCGYYLHAHQLILYHPKTNEVVKIIA 354

Query: 1024 PLPPILQTMEESE 1062
            PLPPIL+T  E+E
Sbjct: 355  PLPPILRTRIEAE 367



 Score = 54.7 bits (130), Expect(2) = e-129
 Identities = 20/40 (50%), Positives = 32/40 (80%)
 Frame = +2

Query: 8   PWPELNAGIYYRDLIRRSDAGATLIEYYTRKYENSAPLHG 127
           PWP+LN G++Y D+++  D+G +LI +Y+ KY++SAPL G
Sbjct: 13  PWPDLNDGLFYNDVVKPPDSGKSLIHFYSWKYKSSAPLEG 52


>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
            predicted protein [Populus trichocarpa]
          Length = 377

 Score =  431 bits (1109), Expect(2) = e-128
 Identities = 208/315 (66%), Positives = 256/315 (81%), Gaps = 2/315 (0%)
 Frame = +1

Query: 124  RRIRNKQITIDGRVVTDADAVIREGEELVYHRLPWKEPDAPFFLEIMYEDNDVIALNKPS 303
            +RI N QITIDG VV +  A++R+G ELVYHRLPW+EPDAP+ L+++YED+D++ALNKP 
Sbjct: 60   QRIHNGQITIDGEVVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPP 119

Query: 304  GLQVLPGGLFQQRTVLTQLQRHVDTLVAS-GCQESHPVPVHRLGRGTSGILLCAKTKLGK 480
            GLQVLPGGLFQQRTVL QLQ       +S   Q SHPVPVHRLGRGTSGILLCAKTK+ K
Sbjct: 120  GLQVLPGGLFQQRTVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAK 179

Query: 481  SRLAALFADGTSIVGASRNKDPQQKAARNITKLYRALASGVIIDDEVVIDQPIGLIKYPG 660
            + LAA FADGTS++G S N + +Q   R I+K+YRAL +G++  D+++I QPIG ++YPG
Sbjct: 180  TSLAAYFADGTSLIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPG 239

Query: 661  VAQGLYVASSSGKPALSKVLVLERNMRSNSTLIQVEIKSGRPHQIRIHLSFIGHPLIGDP 840
            VA+GLYVAS SGKPALSKV VLER+ + N TL+QVEI+SGRPHQIRIHLSFIGHPL+GDP
Sbjct: 240  VAKGLYVASPSGKPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDP 299

Query: 841  LYGTGGQPKCSNLEIVDQNFAQDGGYERPERPVPGDCGYHLHAHRVVFPHPVTNE-ILDI 1017
            LY  GGQP C + E  D++FA+DGGYERP +PVPGDCGY+LHAH++V  HP  NE ++ I
Sbjct: 300  LYDVGGQPMCFDSEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKI 359

Query: 1018 TAPLPPILQTMEESE 1062
            TAPLP IL+T  E+E
Sbjct: 360  TAPLPSILRTQAETE 374



 Score = 55.8 bits (133), Expect(2) = e-128
 Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = +2

Query: 8   PWPELNAGIYYRDLIRRS-DAGATLIEYYTRKYENSAPLHG 127
           PWP+LN G++Y D++  S D+G TLI +Y+ KY+NSAPL G
Sbjct: 17  PWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQG 57