BLASTX nr result

ID: Scutellaria22_contig00025806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025806
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17281.3| unnamed protein product [Vitis vinifera]              144   7e-33
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm...   130   1e-28
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]   129   2e-28
ref|XP_003601650.1| Small subunit processome component-like prot...   123   2e-26
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni...   120   1e-25

>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/129 (56%), Positives = 99/129 (76%)
 Frame = +3

Query: 3    FYSLGANNKEPSSLFYCFLAMSKNYKLVPLLSKEGNLVPDIFSTLKAPSASESFLSYVLK 182
            F   G+++++PSSLF CF+AMS+++ LV LL +E NLV DIFS L   +ASE+ +S VLK
Sbjct: 1191 FKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCVLK 1250

Query: 183  FIKNLLKLDSELGSEDDSVKRVLLPHVDELINSLHFMFTDKKASKRNLVKFPGKREFTIF 362
            FI+NLL LDSEL  ED ++K+VLLP+++ LI SLH +F    A+KR LVK+PG+ E  IF
Sbjct: 1251 FIENLLNLDSELDDEDVTIKKVLLPNIETLICSLHCLFQSCNATKRKLVKYPGETELRIF 1310

Query: 363  KLLSKYVKE 389
            KLLSKY+K+
Sbjct: 1311 KLLSKYIKD 1319


>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
            gi|223542637|gb|EEF44174.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2535

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/132 (53%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3    FYSLGANNKEPSSLFYCFLAMSKNYKLVPLLSKEGNLVPDIFSTLKAPSASESFLSYVLK 182
            F   G ++++PSSLF CFLAMS ++ LVPLLS+E NLVPDIFS L   +ASE+  S VLK
Sbjct: 1182 FKQEGCSSEKPSSLFSCFLAMSSSHHLVPLLSREMNLVPDIFSILTVTTASEAIRSCVLK 1241

Query: 183  FIKNLLKLDSELGSEDDSVKRVLLPHVDELINSLHFMFTDKKASKR---NLVKFPGKREF 353
            FI NLL LD EL  ED+ VK VLLP++D+LI+SLH  F   +A+K     L K+P +   
Sbjct: 1242 FIDNLLNLDEEL-DEDNKVKDVLLPNLDQLISSLHCFFQGNRATKSYTGKLAKYPEEIHI 1300

Query: 354  TIFKLLSKYVKE 389
             +FK+LSKY+++
Sbjct: 1301 RMFKMLSKYIRD 1312


>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score =  129 bits (325), Expect = 2e-28
 Identities = 73/156 (46%), Positives = 99/156 (63%), Gaps = 27/156 (17%)
 Frame = +3

Query: 3    FYSLGANNKEPSSLFYCFLAMSKNYKLVPLLSKEGNLVPDIFSTLKAPSASESFLSYVLK 182
            F   G+++++PSSLF CF+AMS+++ LV LL +E NLV DIFS L   +ASE+ +S VLK
Sbjct: 915  FKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCVLK 974

Query: 183  FIKNLLKLDSELGSEDDSVKRVLLPHVDELINSLHFMFTDKKASK--------------- 317
            FI+NLL LDSEL  ED ++K+VLLP+++ LI SLH +F    A+K               
Sbjct: 975  FIENLLNLDSELDDEDVTIKKVLLPNIETLICSLHCLFQSCNATKSDISCAYGIMILWLN 1034

Query: 318  ------------RNLVKFPGKREFTIFKLLSKYVKE 389
                        R LVK+PG+ E  IFKLLSKY+K+
Sbjct: 1035 ELSLWLTFLDGNRKLVKYPGETELRIFKLLSKYIKD 1070


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/124 (50%), Positives = 89/124 (71%)
 Frame = +3

Query: 18   ANNKEPSSLFYCFLAMSKNYKLVPLLSKEGNLVPDIFSTLKAPSASESFLSYVLKFIKNL 197
            A++++PSSL  CFLAMS N+KLV LL +E +L+PDIFS +   SASE+ +  VLKF++NL
Sbjct: 1232 ASSEKPSSLLSCFLAMSANHKLVALLCREESLIPDIFSIVSVNSASEAIVYCVLKFVENL 1291

Query: 198  LKLDSELGSEDDSVKRVLLPHVDELINSLHFMFTDKKASKRNLVKFPGKREFTIFKLLSK 377
            L LD++L  ED S  +VLL +++ L++S+  +F    A+KR L+K PG+    IFK L K
Sbjct: 1292 LSLDNQLDYEDSSAHKVLLSNIEVLMDSICCLFGSDNAAKRKLIKSPGETVIRIFKFLPK 1351

Query: 378  YVKE 389
            Y+KE
Sbjct: 1352 YIKE 1355


>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
            homolog, partial [Cucumis sativus]
          Length = 2538

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/125 (48%), Positives = 87/125 (69%)
 Frame = +3

Query: 15   GANNKEPSSLFYCFLAMSKNYKLVPLLSKEGNLVPDIFSTLKAPSASESFLSYVLKFIKN 194
            G+++++PSSL  CFLAMS+++KLVPLL++E NLVPDIF  L   +AS+  + +VL+FI+N
Sbjct: 1098 GSSSEKPSSLCSCFLAMSRSHKLVPLLARERNLVPDIFFILTISAASQPIILFVLQFIEN 1157

Query: 195  LLKLDSELGSEDDSVKRVLLPHVDELINSLHFMFTDKKASKRNLVKFPGKREFTIFKLLS 374
            LL  D EL   D +V+ +L P++D L+ SLH +F    A KR L++        IFKLLS
Sbjct: 1158 LLSFDGELDGNDSAVRSILHPNLDSLVQSLHVLFQSGDAKKRKLIEHLNGPMIRIFKLLS 1217

Query: 375  KYVKE 389
            K V++
Sbjct: 1218 KVVRD 1222


Top