BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025647
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   395   e-107
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   381   e-103
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   379   e-102
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   356   8e-96
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   355   2e-95

>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  395 bits (1014), Expect = e-107
 Identities = 197/299 (65%), Positives = 230/299 (76%), Gaps = 7/299 (2%)
 Frame = -2

Query: 1221 NDPPKLENYPVPISLPPPFISKDIELNRALTAXXXXXXXXXSRNDVLFEDDWLIAVNKPQ 1042
            NDP  L+NYP P+S P P ISK IEL RAL+A         SR+DVL+ED WLIAVNKPQ
Sbjct: 14   NDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQ 73

Query: 1041 GVYCECILSSVQNLLHADL-------GEQTKLQEFHLSNRLDRDTSGVTVITKSHKVAAK 883
            GVYCE +L SV  +L A         G +    EFHL+NRLDRDTSGV VITKSHKVA+K
Sbjct: 74   GVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASK 133

Query: 882  LVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGRSRHGAWRVYAVSDVGRTLPGGSFV 703
            LVKAFT+H +KKTY+A C+G  PKW+ I +KSGHGRS+ G WRVYA SDVG+TLPGGS V
Sbjct: 134  LVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTV 193

Query: 702  RDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEEKSETTSCVEKAGVLVRAYPRSGRT 523
            +DMET FE+LSVNG+G   E S  EK   N++VVEEK+   + V+K  +LVRA+P+SGRT
Sbjct: 194  KDMETSFELLSVNGQGSFKELSEFEK-DENILVVEEKAAKNADVKKVEILVRAFPQSGRT 252

Query: 522  HQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHELHAESLSFEHPVTGQPVLIEAPLP 346
            HQIRLHCQYLGI IRGDVKYEGVYEWE R Y+GHELHAE+LSFEHPVTG PV++ APLP
Sbjct: 253  HQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLP 311


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  381 bits (978), Expect = e-103
 Identities = 193/302 (63%), Positives = 225/302 (74%), Gaps = 2/302 (0%)
 Frame = -2

Query: 1245 NSSQSRPGNDPPKLENYPVPISLPPPFISKDIELNRALTAXXXXXXXXXSRNDVLFEDDW 1066
            +SS+   GN P   ENYPVP+S P P ISK++EL RA+ A         S NDV++ED+W
Sbjct: 41   DSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEW 100

Query: 1065 LIAVNKPQGVYCECILSSVQNLL--HADLGEQTKLQEFHLSNRLDRDTSGVTVITKSHKV 892
            LIAVNKPQG+YCE +L++V  LL   A+ G +T L E HL+NRLDRDTSGV VITKSHKV
Sbjct: 101  LIAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160

Query: 891  AAKLVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGRSRHGAWRVYAVSDVGRTLPGG 712
            A+KLVKAFT+H V K+Y+AFCVGT PKWK I VKSGHGRS+ G WRVYA +DVGR+LPGG
Sbjct: 161  ASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220

Query: 711  SFVRDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEEKSETTSCVEKAGVLVRAYPRS 532
            S VRDMET FEVLSVNGK    E     +     IVV  KS       K  +L+RA PRS
Sbjct: 221  SVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRS 280

Query: 531  GRTHQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHELHAESLSFEHPVTGQPVLIEAP 352
            GRTHQIRLHCQYLGIPIRGDVKYEGV EW ++IY+ HELHAESL F HPVTG P+ ++AP
Sbjct: 281  GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAP 340

Query: 351  LP 346
            LP
Sbjct: 341  LP 342


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
            [Cucumis sativus]
          Length = 366

 Score =  379 bits (972), Expect = e-102
 Identities = 192/302 (63%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
 Frame = -2

Query: 1245 NSSQSRPGNDPPKLENYPVPISLPPPFISKDIELNRALTAXXXXXXXXXSRNDVLFEDDW 1066
            +SS+   GN P   ENYPVP+S P P ISK++EL RA+ A         S NDV++ED+W
Sbjct: 41   DSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEW 100

Query: 1065 LIAVNKPQGVYCECILSSVQNLL--HADLGEQTKLQEFHLSNRLDRDTSGVTVITKSHKV 892
            LIAVNKPQG+YCE +L++V  LL   A+ G +T L E HL+NRLDRDTSGV VITKSHKV
Sbjct: 101  LIAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160

Query: 891  AAKLVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGRSRHGAWRVYAVSDVGRTLPGG 712
            A+KLVKAFT+H V K+Y+AFCVGT PKW  I VKSGHGRS+ G WRVYA +DVGR+LPGG
Sbjct: 161  ASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220

Query: 711  SFVRDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEEKSETTSCVEKAGVLVRAYPRS 532
            S VRDMET FEVLSVNGK    E     +     IVV  KS       K  +L+RA PRS
Sbjct: 221  SVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRS 280

Query: 531  GRTHQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHELHAESLSFEHPVTGQPVLIEAP 352
            GRTHQIRLHCQYLGIPIRGDVKYEGV EW ++IY+ HELHAESL F HPVTG P+ ++AP
Sbjct: 281  GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAP 340

Query: 351  LP 346
            LP
Sbjct: 341  LP 342


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  356 bits (913), Expect = 8e-96
 Identities = 187/321 (58%), Positives = 221/321 (68%)
 Frame = -2

Query: 1308 ALVFGISKPLQISSMAAEAHMNSSQSRPGNDPPKLENYPVPISLPPPFISKDIELNRALT 1129
            A V  +   L  ++MA     NS  +     P  L NYP PIS P P ISK IE +RA++
Sbjct: 22   AAVRSLGASLPHTTMAEYIDPNSKDA-----PQILTNYPKPISPPLPAISKHIEQSRAMS 76

Query: 1128 AXXXXXXXXXSRNDVLFEDDWLIAVNKPQGVYCECILSSVQNLLHADLGEQTKLQEFHLS 949
            A          R+D+LFED WL+AVNKPQGVYCE IL SV  +L    G  +  +  HL+
Sbjct: 77   ASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDSDGHDS-CRSLHLA 135

Query: 948  NRLDRDTSGVTVITKSHKVAAKLVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGRSR 769
            NRLDRDTSGV VITKSH+VAAKL+KAF++  V KTYLA C+G  P W+ I +KSGHGRS+
Sbjct: 136  NRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTKTYLALCIGAAPTWEKITIKSGHGRSK 195

Query: 768  HGAWRVYAVSDVGRTLPGGSFVRDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEEKS 589
             GAWRVYA SDVGR LP    ++DM T FEVLSVNG+G   E     K    V+VVEE+S
Sbjct: 196  FGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSVNGQGNVKELPESRKADETVLVVEERS 255

Query: 588  ETTSCVEKAGVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHELHA 409
               S   +  +LVRA+PRSGRTHQIRLHCQYLGI IRGDVKYEGV+EW+ +IY+GHELHA
Sbjct: 256  VIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHA 315

Query: 408  ESLSFEHPVTGQPVLIEAPLP 346
            ESLSFEHPVTG  V   APLP
Sbjct: 316  ESLSFEHPVTGVDVAFRAPLP 336


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
            gi|355480262|gb|AES61465.1| Lon protease-like protein
            [Medicago truncatula]
          Length = 1262

 Score =  355 bits (910), Expect = 2e-95
 Identities = 179/301 (59%), Positives = 218/301 (72%)
 Frame = -2

Query: 1248 MNSSQSRPGNDPPKLENYPVPISLPPPFISKDIELNRALTAXXXXXXXXXSRNDVLFEDD 1069
            M+S      N P  L NYP+P+S   P ISK IELNRA  A         ++  +++ED+
Sbjct: 1    MSSPPHLSENTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDE 60

Query: 1068 WLIAVNKPQGVYCECILSSVQNLLHADLGEQTKLQEFHLSNRLDRDTSGVTVITKSHKVA 889
            +L+AVNKPQG+YC+ +L+S+Q+       + T   E HL+NRLDRDTSGV +ITKSHK+A
Sbjct: 61   YLLAVNKPQGIYCDNVLTSLQS-------QSTVGSELHLANRLDRDTSGVMLITKSHKIA 113

Query: 888  AKLVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGRSRHGAWRVYAVSDVGRTLPGGS 709
            +KLVKAFT+  VKKTY+AFC G VP WK I VKSGHGRS+ GAWRVY  SD GR LPGGS
Sbjct: 114  SKLVKAFTDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGLPGGS 173

Query: 708  FVRDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEEKSETTSCVEKAGVLVRAYPRSG 529
             VR+MET FE LSVNGKG   E + L     NV+VVEEK+      ++  ++VRAYPRSG
Sbjct: 174  VVREMETSFEFLSVNGKGGFREVTELGFEEGNVVVVEEKAVKMEGDDENEIVVRAYPRSG 233

Query: 528  RTHQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHELHAESLSFEHPVTGQPVLIEAPL 349
            RTHQIRLHCQYLGI I GDVKYEGVYEW+ R+Y+GH LHAE+LSF+HPVTG  V+  APL
Sbjct: 234  RTHQIRLHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRVMFRAPL 293

Query: 348  P 346
            P
Sbjct: 294  P 294



 Score = 97.1 bits (240), Expect = 9e-18
 Identities = 74/203 (36%), Positives = 96/203 (47%)
 Frame = -2

Query: 954  LSNRLDRDTSGVTVITKSHKVAAKLVKAFTNHLVKKTYLAFCVGTVPKWKHIVVKSGHGR 775
            L + + R T  V +I KSHKVA+KLVKAFT+H V+KTY++ C G  P W+ I V+S +GR
Sbjct: 927  LQSTIPRQTY-VMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGR 985

Query: 774  SRHGAWRVYAVSDVGRTLPGGSFVRDMETLFEVLSVNGKGCSPESSGLEKHGNNVIVVEE 595
            S+ G  RVY             F+   E  FEV                   ++ +VVEE
Sbjct: 986  SKFGTRRVYV------------FLEVAELGFEV-------------------SDGVVVEE 1014

Query: 594  KSETTSCVEKAGVLVRAYPRSGRTHQIRLHCQYLGIPIRGDVKYEGVYEWEDRIYEGHEL 415
            K+     V+  G              I+ HCQYLGI I GDVKYEG              
Sbjct: 1015 KA-----VKMEG--------------IQFHCQYLGISIIGDVKYEG-------------- 1041

Query: 414  HAESLSFEHPVTGQPVLIEAPLP 346
                  F+H VTG  V++ A LP
Sbjct: 1042 ------FDHLVTGVRVMLCASLP 1058