BLASTX nr result

ID: Scutellaria22_contig00025546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025546
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 h...   475   e-131
ref|XP_002511197.1| brg-1 associated factor, putative [Ricinus c...   460   e-127
ref|XP_004165363.1| PREDICTED: SWI/SNF complex component SNF12 h...   437   e-120
ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 h...   437   e-120
ref|XP_002321698.1| chromatin remodeling complex subunit [Populu...   435   e-119

>ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 546

 Score =  475 bits (1222), Expect = e-131
 Identities = 243/382 (63%), Positives = 283/382 (74%), Gaps = 24/382 (6%)
 Frame = -2

Query: 1074 GRPYFPGHFQLSEPQSQGFGQAQSMKAQAPVQILAPHQ-------------------GHS 952
            G  +FPGHFQLSEPQ+Q   Q Q  +A A  Q  A H                    G S
Sbjct: 45   GGTHFPGHFQLSEPQAQALAQTQYAQAHAQAQAQAAHAQFQAQLQAQAQSLAQLHSAGTS 104

Query: 951  NITISSPSMSTPGSAVAGTGGKRLQKPPSRLSGGSSGQGTASPMKTMELAPTARRGKRKL 772
            N+ +SSPS+STPG+  A  G    QKPPSR  G ++    ASP KTMEL P ARR K KL
Sbjct: 105  NLGVSSPSVSTPGTGSAKRGS---QKPPSRPHGSANATNPASPFKTMELTPAARRKKPKL 161

Query: 771  PDKLIPDKVVAILPECALYTQLLEFESRVDAALVRKKVDIIESLKNPMRVQKVLRIYVFN 592
            P+K IPDK+ A++PE A+YTQL+E E+RVDAAL RKK DI ESLKNP RVQK LRIYVFN
Sbjct: 162  PEKQIPDKIAALVPESAIYTQLVELEARVDAALARKKTDIQESLKNPHRVQKTLRIYVFN 221

Query: 591  TYANQTG-----TNAEPPSWSLRLTGRILEDGQDPVAEGLMKESKSSYPKLSSFIKKITI 427
            T+ANQT      TNAEPPSW+L++ GRILEDG DPV  G   +  SSYPK SSF KK+TI
Sbjct: 222  TFANQTRMNPEKTNAEPPSWTLKIIGRILEDGVDPVLAGTSDKLSSSYPKFSSFFKKMTI 281

Query: 426  YLDQSLYPDNHVILWESSRSPVLHEGFEVKRKGDKEFTAIIRLEMNYMPEKFRLSPALQE 247
            YLDQ LYPDNHVILWE++RSP LHEGFEV+RKGDKEF AIIRLEMNY+PEKF+LS AL E
Sbjct: 282  YLDQGLYPDNHVILWENARSPTLHEGFEVQRKGDKEFNAIIRLEMNYVPEKFKLSTALSE 341

Query: 246  VLGIDVDTRPRIMAALWQYVKIRKLQIPGETSSFMCDPPLRRVFGEDKLKFSMVAQKITS 67
            VLG++VDTRPRI+AA+W YVK RKLQ P + S F+CDPPLR+VFGE+K+KF+MV QKI+ 
Sbjct: 342  VLGLEVDTRPRIVAAIWHYVKSRKLQNPNDPSFFVCDPPLRKVFGEEKIKFAMVPQKISH 401

Query: 66   HLIPPGPIHFEHRVKLSGANPA 1
            HL PP PIH EH+VKLSG +PA
Sbjct: 402  HLSPPQPIHLEHKVKLSGNSPA 423


>ref|XP_002511197.1| brg-1 associated factor, putative [Ricinus communis]
            gi|223550312|gb|EEF51799.1| brg-1 associated factor,
            putative [Ricinus communis]
          Length = 529

 Score =  460 bits (1184), Expect = e-127
 Identities = 231/369 (62%), Positives = 282/369 (76%), Gaps = 11/369 (2%)
 Frame = -2

Query: 1074 GRPYFPGHFQLSEPQSQGFGQAQ-SMKAQAPVQILAPHQGHSNITISSPSMSTPG----- 913
            G P +PGHFQLSE Q+Q  G +Q +  A A  Q       HS   + SP+ S  G     
Sbjct: 40   GVPAYPGHFQLSELQAQVHGHSQYAQAAHAQFQSQVQSSNHSTAQLQSPNPSNAGVPSPS 99

Query: 912  -SAVAGTGGKRL-QKPPSRLSGGSSGQGTASPMKTMELAPTARRGKRKLPDKLIPDKVVA 739
             SA   T  KR  QKPPSR  GGSS   TASP KTMEL P ARR K+K+P+K IPDK+ A
Sbjct: 100  VSAAGTTSAKRANQKPPSRPPGGSSNTNTASPFKTMELTPAARRKKQKIPEKQIPDKIAA 159

Query: 738  ILPECALYTQLLEFESRVDAALVRKKVDIIESLKNPMRVQKVLRIYVFNTYANQTG---T 568
            ILPE ALYTQ+L+FE+R+D+A+ RKK+DI ESLKNP R+QK LR+Y+FNT+ NQ      
Sbjct: 160  ILPESALYTQMLDFEARIDSAMARKKIDIQESLKNPSRIQKTLRVYIFNTHENQAQGEKN 219

Query: 567  NAEPPSWSLRLTGRILEDGQDPVAEGLMKESKSSYPKLSSFIKKITIYLDQSLYPDNHVI 388
            NAEPPSWSL++ GRILEDG+DP+  G   + + SY K SS+ KKITIYLDQSLYPDNHVI
Sbjct: 220  NAEPPSWSLKIVGRILEDGKDPLLSG---KPQKSYSKFSSYFKKITIYLDQSLYPDNHVI 276

Query: 387  LWESSRSPVLHEGFEVKRKGDKEFTAIIRLEMNYMPEKFRLSPALQEVLGIDVDTRPRIM 208
            LWES+RSPVL EGFEVKRKG+KEFTAIIRLEMNY+PEKF+LSP+L E+LGI+V+TRP+I+
Sbjct: 277  LWESARSPVLSEGFEVKRKGNKEFTAIIRLEMNYVPEKFKLSPSLSEILGIEVETRPKIL 336

Query: 207  AALWQYVKIRKLQIPGETSSFMCDPPLRRVFGEDKLKFSMVAQKITSHLIPPGPIHFEHR 28
             A+W YVK ++LQIP + S FMCDPPL+++FGE+K+KF+MV+QKI+ HL PP PIH EHR
Sbjct: 337  VAIWHYVKSKRLQIPNDPSFFMCDPPLKKLFGEEKVKFAMVSQKISQHLTPPQPIHLEHR 396

Query: 27   VKLSGANPA 1
            +KLSG  PA
Sbjct: 397  IKLSGNCPA 405


>ref|XP_004165363.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
          Length = 560

 Score =  437 bits (1124), Expect = e-120
 Identities = 232/368 (63%), Positives = 268/368 (72%), Gaps = 14/368 (3%)
 Frame = -2

Query: 1065 YFPGHFQLSEPQS--------QGFGQAQSMKAQAPVQI-LAPHQGHSNITISSPSMSTPG 913
            +F GHFQLSEPQ+        Q   QAQ+  A A  Q    P Q HS    S+PSMSTPG
Sbjct: 72   HFSGHFQLSEPQTRTMSHVYTQAHAQAQAQSAHAHFQAHTQPVQLHSVNAGSTPSMSTPG 131

Query: 912  SAVAGTGGKRLQKPPSRLSGGSSGQGTASPMKTMELAPTARRGKRKLPDKLIPDKVVAIL 733
            +   G   +  QKPPSR +G S    T SP KTMEL P  RR K KLP+K +PDKV A+L
Sbjct: 132  T---GNSKRPTQKPPSRSAGNSYTIAT-SPFKTMELTPAPRRKKVKLPEKQLPDKVAALL 187

Query: 732  PECALYTQLLEFESRVDAALVRKKVDIIESLKNPMRVQKVLRIYVFNTYANQTGT----- 568
            PE A+YTQLLE E R+DAAL RKK DI ESLKNP R+QK LRIYVFNT+ NQ  +     
Sbjct: 188  PESAIYTQLLEVEGRIDAALARKKNDIQESLKNPPRIQKTLRIYVFNTFENQNHSGSDQK 247

Query: 567  NAEPPSWSLRLTGRILEDGQDPVAEGLMKESKSSYPKLSSFIKKITIYLDQSLYPDNHVI 388
            N E PSWSL++ GRILEDG+DPV  G M+   S+YPK SSF KKITIYLDQSLYPDNH I
Sbjct: 248  NVESPSWSLKIIGRILEDGKDPVIAGAMQNYDSTYPKFSSFFKKITIYLDQSLYPDNHTI 307

Query: 387  LWESSRSPVLHEGFEVKRKGDKEFTAIIRLEMNYMPEKFRLSPALQEVLGIDVDTRPRIM 208
            LWE +RSP L EGFEVKRKGDKEFTA+IRL+MN+ PEKFRLSP+L +VLGI+ DTR RIM
Sbjct: 308  LWEGARSPALQEGFEVKRKGDKEFTAVIRLDMNHTPEKFRLSPSLSDVLGIETDTRSRIM 367

Query: 207  AALWQYVKIRKLQIPGETSSFMCDPPLRRVFGEDKLKFSMVAQKITSHLIPPGPIHFEHR 28
            AALW YVK  KLQ   + S F CDP LR+VFGE+K+KFSMV QKI+ HLIPP PI+ +HR
Sbjct: 368  AALWHYVKANKLQNSSDPSFFTCDPGLRKVFGEEKVKFSMVTQKISQHLIPPQPINLQHR 427

Query: 27   VKLSGANP 4
            VK+SG +P
Sbjct: 428  VKISGNSP 435


>ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
          Length = 560

 Score =  437 bits (1124), Expect = e-120
 Identities = 232/368 (63%), Positives = 268/368 (72%), Gaps = 14/368 (3%)
 Frame = -2

Query: 1065 YFPGHFQLSEPQS--------QGFGQAQSMKAQAPVQI-LAPHQGHSNITISSPSMSTPG 913
            +F GHFQLSEPQ+        Q   QAQ+  A A  Q    P Q HS    S+PSMSTPG
Sbjct: 72   HFSGHFQLSEPQTRTMSHVYTQAHAQAQAQSAHAHFQAHTQPVQLHSVNAGSTPSMSTPG 131

Query: 912  SAVAGTGGKRLQKPPSRLSGGSSGQGTASPMKTMELAPTARRGKRKLPDKLIPDKVVAIL 733
            +   G   +  QKPPSR +G S    T SP KTMEL P  RR K KLP+K +PDKV A+L
Sbjct: 132  T---GNSKRPTQKPPSRSAGNSYTIAT-SPFKTMELTPAPRRKKVKLPEKQLPDKVAALL 187

Query: 732  PECALYTQLLEFESRVDAALVRKKVDIIESLKNPMRVQKVLRIYVFNTYANQTGT----- 568
            PE A+YTQLLE E R+DAAL RKK DI ESLKNP R+QK LRIYVFNT+ NQ  +     
Sbjct: 188  PESAIYTQLLEVEGRIDAALARKKNDIQESLKNPPRIQKTLRIYVFNTFENQNQSGSDQK 247

Query: 567  NAEPPSWSLRLTGRILEDGQDPVAEGLMKESKSSYPKLSSFIKKITIYLDQSLYPDNHVI 388
            N E PSWSL++ GRILEDG+DPV  G M+   S+YPK SSF KKITIYLDQSLYPDNH I
Sbjct: 248  NVESPSWSLKIIGRILEDGKDPVIAGAMQNYDSTYPKFSSFFKKITIYLDQSLYPDNHTI 307

Query: 387  LWESSRSPVLHEGFEVKRKGDKEFTAIIRLEMNYMPEKFRLSPALQEVLGIDVDTRPRIM 208
            LWE +RSP L EGFEVKRKGDKEFTA+IRL+MN+ PEKFRLSP+L +VLGI+ DTR RIM
Sbjct: 308  LWEGARSPALQEGFEVKRKGDKEFTAVIRLDMNHTPEKFRLSPSLSDVLGIETDTRSRIM 367

Query: 207  AALWQYVKIRKLQIPGETSSFMCDPPLRRVFGEDKLKFSMVAQKITSHLIPPGPIHFEHR 28
            AALW YVK  KLQ   + S F CDP LR+VFGE+K+KFSMV QKI+ HLIPP PI+ +HR
Sbjct: 368  AALWHYVKANKLQNSSDPSFFTCDPGLRKVFGEEKVKFSMVTQKISQHLIPPQPINLQHR 427

Query: 27   VKLSGANP 4
            VK+SG +P
Sbjct: 428  VKISGNSP 435


>ref|XP_002321698.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222868694|gb|EEF05825.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 515

 Score =  435 bits (1119), Expect = e-119
 Identities = 232/374 (62%), Positives = 272/374 (72%), Gaps = 16/374 (4%)
 Frame = -2

Query: 1074 GRPYFPGHFQLSEPQSQGFGQAQ-SMKAQAPVQILAPHQGHS----------NITISSPS 928
            G P FPGHFQLSEPQ++  G  Q +  A    Q       HS          N+ + SP 
Sbjct: 24   GGPAFPGHFQLSEPQARVLGYTQFAQAAHTQFQSHIQSTNHSVAQLQNANSANVGVQSPP 83

Query: 927  MSTPGSAVAGTGGKRLQKPPSRLSGGSSGQGTASPMKTMELAPTARRGKRKLPDKLIPDK 748
            + TP S+ A    K   KPPSR S GSS    AS  KTMELAP  RR KRKL +K IPDK
Sbjct: 84   VPTPSSSSAK---KTSYKPPSRPSSGSSNANMASLFKTMELAPAVRRKKRKLHEKEIPDK 140

Query: 747  VVAILPECALYTQLLEFESRVDAALVRKKVDIIESLKNPMRVQKVLRIYVFNTYANQT-G 571
            VV +LPE ALYTQLLEFE+RVDAA+ RKK+DI ESLKNP RV K LR+YVFNT+ NQ  G
Sbjct: 141  VVPVLPESALYTQLLEFEARVDAAMARKKMDIQESLKNPSRVWKTLRVYVFNTFENQVLG 200

Query: 570  TN----AEPPSWSLRLTGRILEDGQDPVAEGLMKESKSSYPKLSSFIKKITIYLDQSLYP 403
            +N    AEPPSWSL++ GRILEDG+DPV  G+   ++  YPK SS+ KKITIYLDQSLY 
Sbjct: 201  SNERKSAEPPSWSLKIIGRILEDGKDPVLTGM---TQKPYPKFSSYFKKITIYLDQSLYL 257

Query: 402  DNHVILWESSRSPVLHEGFEVKRKGDKEFTAIIRLEMNYMPEKFRLSPALQEVLGIDVDT 223
            DNHVILWES+RSPVLHEGFEVKRKG+KEFTA IRLEMNY+PEKF+LSP L E+LGI+V+T
Sbjct: 258  DNHVILWESTRSPVLHEGFEVKRKGNKEFTARIRLEMNYVPEKFKLSPTLSEILGIEVET 317

Query: 222  RPRIMAALWQYVKIRKLQIPGETSSFMCDPPLRRVFGEDKLKFSMVAQKITSHLIPPGPI 43
            RPRI+ A+W YVK RKLQ P + S F CDPPL+++FGE+K+KFS V Q+I+ HL PP PI
Sbjct: 318  RPRILVAIWHYVKSRKLQNPNDPSFFTCDPPLQKLFGEEKMKFSQVLQRISLHLTPPQPI 377

Query: 42   HFEHRVKLSGANPA 1
              EH +KLSG  PA
Sbjct: 378  LLEHSIKLSGNCPA 391


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