BLASTX nr result

ID: Scutellaria22_contig00025480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00025480
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43

>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  184 bits (466), Expect = 9e-45
 Identities = 85/125 (68%), Positives = 97/125 (77%)
 Frame = -3

Query: 400 KVHIFLVGDQSHPKTREIFEFLEKVSKRMKEEGYVPHTNYVLHDVEDEQKEQNLSYHSEK 221
           +VH+FLVGD SHPKT +I EFL ++SK++KEEGYVP TN+VLHDVE+EQKEQNL YHSEK
Sbjct: 569 QVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEK 628

Query: 220 LAVAFGIISTPPGTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXRFHCFESGSCS 41
           LAV FGIISTPPGTP+KVFKNLRTCVDCH                    RFHCFE GSCS
Sbjct: 629 LAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCS 688

Query: 40  CQDFW 26
           C+D+W
Sbjct: 689 CKDYW 693


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/125 (69%), Positives = 97/125 (77%)
 Frame = -3

Query: 400 KVHIFLVGDQSHPKTREIFEFLEKVSKRMKEEGYVPHTNYVLHDVEDEQKEQNLSYHSEK 221
           +VH+FLVGD SH K++EI EFL K+SKRMKEEGYVP TN+VLHDVE+EQKEQNLSYHSEK
Sbjct: 163 EVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEK 222

Query: 220 LAVAFGIISTPPGTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXRFHCFESGSCS 41
           LAVAFGIISTP GT +KVFKNLRTCVDCH                    RFHCFE GSCS
Sbjct: 223 LAVAFGIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCS 282

Query: 40  CQDFW 26
           C+D+W
Sbjct: 283 CRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/125 (69%), Positives = 97/125 (77%)
 Frame = -3

Query: 400 KVHIFLVGDQSHPKTREIFEFLEKVSKRMKEEGYVPHTNYVLHDVEDEQKEQNLSYHSEK 221
           +VH+FLVGD SH K++EI EFL K+SKRMKEEGYVP TN+VLHDVE+EQKEQNLSYHSEK
Sbjct: 164 EVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEK 223

Query: 220 LAVAFGIISTPPGTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXRFHCFESGSCS 41
           LAVAFGIISTP GT +KVFKNLRTCVDCH                    RFHCFE GSCS
Sbjct: 224 LAVAFGIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCS 283

Query: 40  CQDFW 26
           C+D+W
Sbjct: 284 CRDYW 288


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/124 (70%), Positives = 96/124 (77%)
 Frame = -3

Query: 397 VHIFLVGDQSHPKTREIFEFLEKVSKRMKEEGYVPHTNYVLHDVEDEQKEQNLSYHSEKL 218
           VH+FLVGD SHPK++EI EFL K+SKRMKEEG+VP TN+VLHDVEDEQKEQNLSYHSEKL
Sbjct: 553 VHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKL 612

Query: 217 AVAFGIISTPPGTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXRFHCFESGSCSC 38
           AVAFGIISTP GTP+KVFKNLRTCVDCH                    RFH FE G CSC
Sbjct: 613 AVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSC 672

Query: 37  QDFW 26
           +D+W
Sbjct: 673 RDYW 676


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/125 (67%), Positives = 96/125 (76%)
 Frame = -3

Query: 400 KVHIFLVGDQSHPKTREIFEFLEKVSKRMKEEGYVPHTNYVLHDVEDEQKEQNLSYHSEK 221
           +VH+F VGD SHPK++EI E+L ++SKRMKE GYVP TN+VLHDVE EQKE+NLSYHSEK
Sbjct: 600 EVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEK 659

Query: 220 LAVAFGIISTPPGTPVKVFKNLRTCVDCHXXXXXXXXXXXXXXXXXXXXRFHCFESGSCS 41
           LAVAFGIISTP GTP+KVFKNLRTCVDCH                    RFHCFE GSCS
Sbjct: 660 LAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCS 719

Query: 40  CQDFW 26
           C+D+W
Sbjct: 720 CKDYW 724


Top