BLASTX nr result

ID: Scutellaria22_contig00022398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022398
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...   338   4e-91
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]   338   4e-91
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis tha...   333   1e-89
ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis tha...   329   3e-88
ref|XP_002530707.1| DNA polymerase delta small subunit, putative...   328   7e-88

>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
           gi|297739835|emb|CBI30017.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score =  338 bits (868), Expect = 4e-91
 Identities = 167/219 (76%), Positives = 183/219 (83%)
 Frame = -1

Query: 657 KQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKPHLPVCTVLGLEE 478
           KQS+Y  LDE F I+KE YRGQQYSQIYF RLH+MRTL+YSL+P WKPHLPVCTVLGLEE
Sbjct: 12  KQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEE 71

Query: 477 GKECIIVGTLYKHMKLKPSILDEYSKERSASPLVQPHNFMHSDDYLVLEDESGRVKLRGT 298
           GKECIIVGTLYKHMKLKP ILDEYSKERS +PLV+PHNFMHSDD LVLEDESGRVKL GT
Sbjct: 72  GKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGT 131

Query: 297 PLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGEDKXXXXXXXXXXX 118
            LLPSVYVTG VV LHGKET AG+F+V++I +A LP QIE PL S EDK           
Sbjct: 132 MLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVG 191

Query: 117 XXSANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAG 1
             ++NPL FQLLVDHITGHLGDE+EQGIAA+IV VVIAG
Sbjct: 192 SSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAG 230


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score =  338 bits (868), Expect = 4e-91
 Identities = 167/219 (76%), Positives = 182/219 (83%)
 Frame = -1

Query: 657 KQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKPHLPVCTVLGLEE 478
           KQS+Y  LDE F I+KE YRGQQYSQIYF RLH+MRTL+YSL+P WKPHLPVCTVLGLEE
Sbjct: 12  KQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEE 71

Query: 477 GKECIIVGTLYKHMKLKPSILDEYSKERSASPLVQPHNFMHSDDYLVLEDESGRVKLRGT 298
           GKECIIVGTLYKHMKLKP ILDEYSKERS +PLV+PHNFMHSDD LVLEDESGRVKL GT
Sbjct: 72  GKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGT 131

Query: 297 PLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGEDKXXXXXXXXXXX 118
            LLPSVYVTG VV LHGKET AG+F+V++I +A LP QIE PL S EDK           
Sbjct: 132 MLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVG 191

Query: 117 XXSANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAG 1
              +NPL FQLLVDHITGHLGDE+EQGIAA+IV VVIAG
Sbjct: 192 SSXSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAG 230


>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
           gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
           polymerase delta small subunit
           gi|22531160|gb|AAM97084.1| putative DNA polymerase delta
           small subunit [Arabidopsis thaliana]
           gi|31376377|gb|AAP49515.1| At2g42120 [Arabidopsis
           thaliana] gi|62320658|dbj|BAD95325.1| DNA polymerase
           delta small subunit like protein [Arabidopsis thaliana]
           gi|330254978|gb|AEC10072.1| DNA polymerase delta subunit
           2 [Arabidopsis thaliana]
          Length = 440

 Score =  333 bits (855), Expect = 1e-89
 Identities = 164/219 (74%), Positives = 182/219 (83%)
 Frame = -1

Query: 657 KQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKPHLPVCTVLGLEE 478
           KQS Y  LDE FEIQKE+YRGQQYSQIYF RLHLMRTLLYSL PTWK HLPVC VLGLE+
Sbjct: 12  KQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSHLPVCKVLGLEK 71

Query: 477 GKECIIVGTLYKHMKLKPSILDEYSKERSASPLVQPHNFMHSDDYLVLEDESGRVKLRGT 298
           GKECIIVGTL+KHMKLKP +LDEYSKERS +PLV+PHNFMH DD L+LEDESGRVKL G+
Sbjct: 72  GKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDESGRVKLAGS 131

Query: 297 PLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGEDKXXXXXXXXXXX 118
            L P++YVTG+VVALHGKET AG+F VE++ EAGLP QIERP++  EDK           
Sbjct: 132 ALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDKYVVLLSGLCIG 191

Query: 117 XXSANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAG 1
             SANPL FQLLVDHITGHLGDE EQG+AA+IV VVIAG
Sbjct: 192 SKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAG 230


>ref|NP_181742.2| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
           gi|330254979|gb|AEC10073.1| DNA polymerase delta subunit
           2 [Arabidopsis thaliana]
          Length = 441

 Score =  329 bits (843), Expect = 3e-88
 Identities = 164/220 (74%), Positives = 182/220 (82%), Gaps = 1/220 (0%)
 Frame = -1

Query: 657 KQSMYTFL-DESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKPHLPVCTVLGLE 481
           KQS Y  L DE FEIQKE+YRGQQYSQIYF RLHLMRTLLYSL PTWK HLPVC VLGLE
Sbjct: 12  KQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSHLPVCKVLGLE 71

Query: 480 EGKECIIVGTLYKHMKLKPSILDEYSKERSASPLVQPHNFMHSDDYLVLEDESGRVKLRG 301
           +GKECIIVGTL+KHMKLKP +LDEYSKERS +PLV+PHNFMH DD L+LEDESGRVKL G
Sbjct: 72  KGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILEDESGRVKLAG 131

Query: 300 TPLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGEDKXXXXXXXXXX 121
           + L P++YVTG+VVALHGKET AG+F VE++ EAGLP QIERP++  EDK          
Sbjct: 132 SALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDKYVVLLSGLCI 191

Query: 120 XXXSANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAG 1
              SANPL FQLLVDHITGHLGDE EQG+AA+IV VVIAG
Sbjct: 192 GSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAG 231


>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
           gi|223529721|gb|EEF31661.1| DNA polymerase delta small
           subunit, putative [Ricinus communis]
          Length = 425

 Score =  328 bits (840), Expect = 7e-88
 Identities = 165/219 (75%), Positives = 178/219 (81%)
 Frame = -1

Query: 657 KQSMYTFLDESFEIQKEIYRGQQYSQIYFTRLHLMRTLLYSLLPTWKPHLPVCTVLGLEE 478
           KQ  Y  LDE++EIQ E YRGQQYSQIYF RLH++RTLLYSL+P WK HLPVCTVLGL E
Sbjct: 12  KQCTYASLDETYEIQNETYRGQQYSQIYFARLHMIRTLLYSLVPLWKSHLPVCTVLGLVE 71

Query: 477 GKECIIVGTLYKHMKLKPSILDEYSKERSASPLVQPHNFMHSDDYLVLEDESGRVKLRGT 298
           GKECIIVGTLYKHMKLKP ILDEYSKERSA PLV+PHNFMH DD+LVLEDESGRVKL G 
Sbjct: 72  GKECIIVGTLYKHMKLKPCILDEYSKERSAIPLVKPHNFMHLDDHLVLEDESGRVKLGGD 131

Query: 297 PLLPSVYVTGIVVALHGKETGAGDFMVEEIFEAGLPHQIERPLNSGEDKXXXXXXXXXXX 118
            L PS YVTG+VVALHGKETGAGDFMV ++ EAGLP QIE PL S EDK           
Sbjct: 132 MLTPSAYVTGLVVALHGKETGAGDFMVLDVLEAGLPPQIELPLQSREDKYVVFVSGLNVG 191

Query: 117 XXSANPLHFQLLVDHITGHLGDEREQGIAAEIVQVVIAG 1
             + NPL FQLLVDHITGHLG+E+EQ IAAEIV VVIAG
Sbjct: 192 SSTFNPLQFQLLVDHITGHLGNEKEQAIAAEIVHVVIAG 230


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