BLASTX nr result

ID: Scutellaria22_contig00022269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022269
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group]      69   4e-10
dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativ...    68   7e-10
gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc...    65   6e-09
emb|CAE03622.2| OSJNBb0003B01.13 [Oryza sativa Japonica Group]         65   6e-09
gb|ABA99729.1| retrotransposon protein, putative, unclassified [...    64   2e-08

>gb|AAU90115.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1626

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = -2

Query: 270  GDLVLRQSDALLEIGKLDAIWEGPYTVTKVLPGGSYELADEHGKELPRPWHINHLKKFY 94
            GDLVLR+  + L + KL  +WEGPY V KV   GS  L  E G ELP PW+I HL++FY
Sbjct: 1567 GDLVLRRVQSRLGLSKLSPMWEGPYKVIKVPRPGSVRLTMEDGTELPNPWNIEHLRRFY 1625


>dbj|BAC05657.1| putatitive retrotransposon Cinful-1 [Oryza sativa Japonica Group]
          Length = 1739

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/59 (52%), Positives = 39/59 (66%)
 Frame = -2

Query: 270  GDLVLRQSDALLEIGKLDAIWEGPYTVTKVLPGGSYELADEHGKELPRPWHINHLKKFY 94
            GDLVLR+  + LE+ KL  +WEGPY V  V   GS +L  E   ELP PW+I HL++FY
Sbjct: 1635 GDLVLRRVQSRLELSKLSPMWEGPYKVIGVPRPGSVQLTTEDSTELPNPWNIEHLRRFY 1693


>gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1564

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/59 (52%), Positives = 37/59 (62%)
 Frame = -2

Query: 270  GDLVLRQSDALLEIGKLDAIWEGPYTVTKVLPGGSYELADEHGKELPRPWHINHLKKFY 94
            GDLVLR+  + L + KL   WEGPY V  V   GS  L  E G ELP PW+I HL++FY
Sbjct: 1505 GDLVLRRVQSRLGLSKLSPTWEGPYKVICVPRPGSVRLTMEDGTELPNPWNIEHLRRFY 1563


>emb|CAE03622.2| OSJNBb0003B01.13 [Oryza sativa Japonica Group]
          Length = 1144

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/59 (50%), Positives = 38/59 (64%)
 Frame = -2

Query: 270  GDLVLRQSDALLEIGKLDAIWEGPYTVTKVLPGGSYELADEHGKELPRPWHINHLKKFY 94
            GDL+LR+  + L + KL  +WEGPY V  V   GS  L  E G ELP PW+I HL++FY
Sbjct: 1085 GDLILRRVQSRLGLSKLLPMWEGPYKVIGVPRPGSVRLTTEDGTELPNPWNIEHLRRFY 1143


>gb|ABA99729.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1320

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 270  GDLVLRQSDALLEIGKLDAIWEGPYTVTKVLPGGSYELADEHGKELPRPWHINHLKKFY 94
            GD+VL +  + L + KL  +WEGPY V  VL  GS  L  E G ELP PW+I HL +FY
Sbjct: 1261 GDVVLCRVQSRLGLSKLSPMWEGPYKVIGVLRLGSVRLTTEDGTELPNPWNIEHLHRFY 1319