BLASTX nr result

ID: Scutellaria22_contig00022240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022240
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]    67   1e-09
ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...    67   1e-09
ref|XP_002513610.1| pentatricopeptide repeat-containing protein,...    66   3e-09
ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago ...    60   2e-07

>ref|XP_002330010.1| predicted protein [Populus trichocarpa] gi|222871435|gb|EEF08566.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = +3

Query: 171 PGMLKRATANTEASIIQILDKSKDIKTLHKLHARILSDPQFCSDTSLAIKLMRAYAACGR 350
           P +  + TA TE    +ILD + D KTL KLH++IL D     + SL IKLMRAYAACG 
Sbjct: 27  PQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGE 86

Query: 351 PDLTRKLFDEIT 386
           P  TR +FDEIT
Sbjct: 87  PCYTRHIFDEIT 98


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/71 (52%), Positives = 44/71 (61%)
 Frame = +3

Query: 171  PGMLKRATANTEASIIQILDKSKDIKTLHKLHARILSDPQFCSDTSLAIKLMRAYAACGR 350
            P   ++    TE    QILDK+ DIK L KLH++I  D    S+ SL IKLMRAYA CG 
Sbjct: 1016 PKFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGE 1075

Query: 351  PDLTRKLFDEI 383
            P  TR +FDEI
Sbjct: 1076 PWSTRHIFDEI 1086


>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 37/71 (52%), Positives = 44/71 (61%)
 Frame = +3

Query: 171 PGMLKRATANTEASIIQILDKSKDIKTLHKLHARILSDPQFCSDTSLAIKLMRAYAACGR 350
           P   ++    TE    QILDK+ DIK L KLH++I  D    S+ SL IKLMRAYA CG 
Sbjct: 27  PKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGE 86

Query: 351 PDLTRKLFDEI 383
           P  TR +FDEI
Sbjct: 87  PWSTRHIFDEI 97


>ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547518|gb|EEF49013.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 660

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%)
 Frame = +3

Query: 186 RATANTEASIIQILDKSKDIKTLHKLHARILSDPQFCSDTSLAIKLMRAYAACGRPDLTR 365
           R  + TE    +ILD+  DI TL KLH ++L+D     + S+ IKLMR YAACG P L R
Sbjct: 15  RQLSFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLAR 74

Query: 366 KLFDEIT 386
            +FDEIT
Sbjct: 75  HIFDEIT 81


>ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
           gi|355522693|gb|AET03147.1| hypothetical protein
           MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
 Frame = +3

Query: 213 IIQILDKSKDIKTLHKLHARI--LSDPQFCSDTSLAIKLMRAYAACGRPDLTRKLFDEIT 386
           + + LD++ DIKTL KLH  I  L+  Q   + SL IKLMR+YAACG P LTRK+FDE++
Sbjct: 24  LAKALDQNPDIKTLKKLHTMIFYLNSHQ---NPSLGIKLMRSYAACGEPGLTRKVFDEMS 80


Top