BLASTX nr result

ID: Scutellaria22_contig00022203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022203
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   123   2e-26
ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat...   123   2e-26
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002533336.1| pentatricopeptide repeat-containing protein,...   120   1e-25
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]   117   1e-24

>ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/118 (48%), Positives = 81/118 (68%)
 Frame = -2

Query: 354 TTLPSLSDVAASHCQSIKLSLITDVYTSNKLISRYAKCKDLSSSLKVFDDMPHRDTASWN 175
           T+  +L+++  +H  ++KL  I DVYT N +++ Y KCK+L S+  +FD+MP RD+ SWN
Sbjct: 9   TSFRALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWN 68

Query: 174 TILTGSVNSRNFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYGQQVHSDIV 1
           T++ G +N  N   +WDV++ M+S GF  D YTFGSMLKGIA  G    GQQVHS I+
Sbjct: 69  TMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126


>ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/118 (48%), Positives = 81/118 (68%)
 Frame = -2

Query: 354 TTLPSLSDVAASHCQSIKLSLITDVYTSNKLISRYAKCKDLSSSLKVFDDMPHRDTASWN 175
           T+  +L+++  +H  ++KL  I DVYT N +++ Y KCK+L S+  +FD+MP RD+ SWN
Sbjct: 9   TSFRALANLLLNHSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWN 68

Query: 174 TILTGSVNSRNFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYGQQVHSDIV 1
           T++ G +N  N   +WDV++ M+S GF  D YTFGSMLKGIA  G    GQQVHS I+
Sbjct: 69  TMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126


>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/128 (46%), Positives = 87/128 (67%), Gaps = 2/128 (1%)
 Frame = -2

Query: 378 QPWQLLRETTLPSLSDVAASHCQSIKLSLITDVYTSNKLISRYAKC--KDLSSSLKVFDD 205
           +P   + E++  +L +V  +HCQ+ K  +I+ +Y +N ++ RY+KC   DL+ + K+FD+
Sbjct: 2   RPLNSVVESSRHALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDE 61

Query: 204 MPHRDTASWNTILTGSVNSRNFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYG 25
           MPH+DT +WNT++TG V S N   AW+ +KSMK  GF  DGYTFGS+LKG+A       G
Sbjct: 62  MPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLG 121

Query: 24  QQVHSDIV 1
           QQVHS IV
Sbjct: 122 QQVHSLIV 129


>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  120 bits (300), Expect = 1e-25
 Identities = 57/128 (44%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
 Frame = -2

Query: 378 QPWQLLRETTLPSLSDVAASHCQSIKLSLITDVYTSNKLISRYAKCKD--LSSSLKVFDD 205
           +P   + +++  +L ++  +HCQ+IKL    D+Y +N ++SRY +C    L+ +  +FD+
Sbjct: 2   RPLNSVIDSSKHALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDE 61

Query: 204 MPHRDTASWNTILTGSVNSRNFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYG 25
           M HRDT +WNT+++G VNS +   AW++ KSMKS G + D YTFGS+LKG+A    L  G
Sbjct: 62  MSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVG 121

Query: 24  QQVHSDIV 1
           QQVHS IV
Sbjct: 122 QQVHSLIV 129


>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/126 (44%), Positives = 81/126 (64%)
 Frame = -2

Query: 378 QPWQLLRETTLPSLSDVAASHCQSIKLSLITDVYTSNKLISRYAKCKDLSSSLKVFDDMP 199
           +P   L +++  +L   + +HC +IK      +YT+N +IS YAKC ++  + K+FD+  
Sbjct: 2   RPLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETS 61

Query: 198 HRDTASWNTILTGSVNSRNFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYGQQ 19
            RD  SWNT++ G VN  NF  A + +KSMK  GF  DGY+FGS+LKG+A  G ++ GQQ
Sbjct: 62  QRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQ 121

Query: 18  VHSDIV 1
           VHS IV
Sbjct: 122 VHSMIV 127



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -2

Query: 318 HCQSIKLSLITDVYTSNKLISRYAKC--KDLSSSLKVFDDMPHRDTASWNTILTGSVNSR 145
           H   IK  L   V  SN LI+ Y K   K +  +L +F+ + ++D  SWN+ILTG   S 
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385

Query: 144 NFFDAWDVMKSMKSLGFLFDGYTFGSMLKGIAIGGGLKYGQQVH 13
              DA    ++M+S   + D Y F ++L+  +    L+ GQQVH
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH 429


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