BLASTX nr result

ID: Scutellaria22_contig00022189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00022189
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...   290   6e-76
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]     287   3e-75
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...   281   2e-73
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              277   3e-72
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   275   2e-71

>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  290 bits (741), Expect = 6e-76
 Identities = 150/269 (55%), Positives = 202/269 (75%), Gaps = 2/269 (0%)
 Frame = +1

Query: 79  MMFESSQFDSPASGFVSSQLSDPSPTSAKSRDAQPMYPVTVKQIMEASLSMDDKSNFLID 258
           M   SSQFD  + GF SSQ +D   +SAKSR+ Q + PVTVKQI EAS S DDKSNF ID
Sbjct: 1   MQMFSSQFDPFSGGFSSSQSTDSGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQID 60

Query: 259 GVGVYNVKIVGIVSDKSVRVTDVSFVIDDGTGRIGCNKWVNDQHDTQEVEELMDGIYVRI 438
           GV V N+ +VG+V DKS RVTDVSF +DDGTGRI C +WVN+  DT+E+E + DGIYVR+
Sbjct: 61  GVDVTNITLVGMVFDKSERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVRL 120

Query: 439 HGHLKSLQGKKQVVVYAIRPVNDHNEIANHFLECVHAHCCSTRSQIQNSDSSTP--ASLI 612
           +GHL+S  G +Q+V +++RPV + +EIA HF+E +H H  ++++++ +   + P  AS+ 
Sbjct: 121 NGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQPLSASVK 180

Query: 613 VIDSGYQTTSSSQLSQEYNLDGLGSIHKKVLDYLQLPSSLSQEKGIHRNEIAQKLKISQE 792
              +GYQT SS QLS + ++DG+  + + VLDYLQ PS+  +EKGIHR+E++Q+LKIS E
Sbjct: 181 TESTGYQTPSS-QLSAQ-SVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTE 238

Query: 793 KIIESMESLESEGLVYSTIDEFHYKSTAS 879
           KI+ES+ +LE EGL+YSTIDEFHYKST S
Sbjct: 239 KIMESIRTLEEEGLIYSTIDEFHYKSTTS 267


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score =  287 bits (735), Expect = 3e-75
 Identities = 151/283 (53%), Positives = 207/283 (73%), Gaps = 14/283 (4%)
 Frame = +1

Query: 73  RKMMFESSQFDSPAS----GFVSSQL----SDPSPTSAKSRDAQPMYPVTVKQIMEASLS 228
           R M   ++QFD  A+    GF+ SQ     SD S +  K+RD+Q + P+TVKQI EA  S
Sbjct: 18  RAMYGGNNQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQS 77

Query: 229 MDDKSNFLIDGVGVYNVKIVGIVSDKSVRVTDVSFVIDDGTGRIGCNKWVNDQHDTQEVE 408
            DDK+NFLIDGV V NVK+VGI+ +K+  +T VSFV+DDGTGR+ C +WVN+  DT+E+E
Sbjct: 78  SDDKTNFLIDGVDVNNVKLVGILFNKAEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEME 137

Query: 409 ELMDGIYVRIHGHLKSLQGKKQVVVYAIRPVNDHNEIANHFLECVHAHCCSTRSQIQNSD 588
            L +GIYVR+HGHLK  QGKKQ++ Y++RPV+D+NEIA+HF E ++ H  ++R + Q  D
Sbjct: 138 ALTNGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQ-QD 196

Query: 589 SSTPASLIVIDS------GYQTTSSSQLSQEYNLDGLGSIHKKVLDYLQLPSSLSQEKGI 750
           SS  ++ +   S      GYQ ++S+Q    +N+DG+G +HK VLDYLQ PS L+ EKG+
Sbjct: 197 SSFMSAQVPSSSFNTPLKGYQASASNQF-PGFNMDGIGGVHKMVLDYLQQPSCLALEKGV 255

Query: 751 HRNEIAQKLKISQEKIIESMESLESEGLVYSTIDEFHYKSTAS 879
           HRNE+AQ+L++  EKI+ +ME+LESEGLVYSTID+FHYKST +
Sbjct: 256 HRNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGN 298


>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score =  281 bits (719), Expect = 2e-73
 Identities = 142/274 (51%), Positives = 201/274 (73%), Gaps = 9/274 (3%)
 Frame = +1

Query: 82  MFESSQFDSPASGFVSSQLSDPSPTSAKSRDAQPMYPVTVKQIMEASLSMDDKSNFLIDG 261
           MF S+QFDS ASGF SSQ +D S  SAKSR++  + PVTVKQI EAS S ++K+NF+I+G
Sbjct: 1   MFSSTQFDS-ASGFTSSQTNDSS--SAKSRESPGLIPVTVKQISEASHSGEEKANFVING 57

Query: 262 VGVYNVKIVGIVSDKSVRVTDVSFVIDDGTGRIGCNKWVNDQHDTQEVEELMDGIYVRIH 441
           V + NV IVG VS+K+ R TD++F +DDGTG IGC +WVND  DT ++EE+ DG+YVR++
Sbjct: 58  VDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVN 117

Query: 442 GHLKSLQGKKQVVVYAIRPVNDHNEIANHFLECVHAHCCSTR---------SQIQNSDSS 594
           GHLK  Q  KQ+  +++RPV + +EI  HF+EC+H H  +++         +Q+Q SDS 
Sbjct: 118 GHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQNLKGNGSTQLQTSDSI 177

Query: 595 TPASLIVIDSGYQTTSSSQLSQEYNLDGLGSIHKKVLDYLQLPSSLSQEKGIHRNEIAQK 774
               +    +GY TTSS+  S+++ +D   S  + VLDYLQLPSS+++E+GIH++E++Q+
Sbjct: 178 VKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHKDELSQQ 237

Query: 775 LKISQEKIIESMESLESEGLVYSTIDEFHYKSTA 876
           LK+  EKI++S+ SLE EGL+YSTIDEFH+KS A
Sbjct: 238 LKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA 271


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  277 bits (709), Expect = 3e-72
 Identities = 142/278 (51%), Positives = 201/278 (72%), Gaps = 12/278 (4%)
 Frame = +1

Query: 82  MFESSQFDSPAS----GFVSSQLS---DPSPTSAKSRDAQPMYPVTVKQIMEASLSMDDK 240
           M+  SQFD  A+    GF+ SQ +   +P  + A++RD Q + P+TVKQI EA LS DDK
Sbjct: 1   MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 241 SNFLIDGVGVYNVKIVGIVSDKSVRVTDVSFVIDDGTGRIGCNKWVNDQHDTQEVEELMD 420
           SNFLIDGV V NV +VG+V +K+ RVTDV F++DDGTGRI CN+WVN+  DT+E+E ++D
Sbjct: 61  SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 421 GIYVRIHGHLKSLQGKKQVVVYAIRPVNDHNEIANHFLECVHAHCCSTRSQIQ-----NS 585
           G+YVR+HGHLK  QGK+ + V++IRPV D NEIA+HF+EC++ H  +T+S++Q      S
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRVQAGGPTQS 180

Query: 586 DSSTPASLIVIDSGYQTTSSSQLSQEYNLDGLGSIHKKVLDYLQLPSSLSQEKGIHRNEI 765
             + PA    +  GYQ +  +Q S +Y   GL  + + V+DYLQ P SL++++G+ R+E+
Sbjct: 181 HVTNPAIGTPL-KGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDEL 238

Query: 766 AQKLKISQEKIIESMESLESEGLVYSTIDEFHYKSTAS 879
           AQ+L +  +KI+ES+ SLE EGL+YSTIDE+HYKST +
Sbjct: 239 AQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGN 276


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  275 bits (703), Expect = 2e-71
 Identities = 140/275 (50%), Positives = 198/275 (72%), Gaps = 9/275 (3%)
 Frame = +1

Query: 82  MFESSQFDSPAS----GFVSSQLS---DPSPTSAKSRDAQPMYPVTVKQIMEASLSMDDK 240
           M+  SQFD  A+    GF+ SQ +   +P  + A++RD Q + P+TVKQI EA LS DDK
Sbjct: 1   MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 241 SNFLIDGVGVYNVKIVGIVSDKSVRVTDVSFVIDDGTGRIGCNKWVNDQHDTQEVEELMD 420
           SNFLIDGV V NV +VG+V +K+ RVTDV F++DDGTGRI CN+WVN+  DT+E+E ++D
Sbjct: 61  SNFLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGILD 120

Query: 421 GIYVRIHGHLKSLQGKKQVVVYAIRPVNDHNEIANHFLECVHAHCCSTRSQIQNSDSS-- 594
           G+YVR+HGHLK  QGK+ + V++IRPV D NEIA+HF+EC++ H  +T+S+      S  
Sbjct: 121 GMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRAGGPTQSHV 180

Query: 595 TPASLIVIDSGYQTTSSSQLSQEYNLDGLGSIHKKVLDYLQLPSSLSQEKGIHRNEIAQK 774
           T  ++     GYQ +  +Q S +Y   GL  + + V+DYLQ P SL++++G+ R+E+AQ+
Sbjct: 181 TNPAIGTPLKGYQASQPNQFSGQYGA-GLKGVDQLVIDYLQQPQSLARDQGVGRDELAQQ 239

Query: 775 LKISQEKIIESMESLESEGLVYSTIDEFHYKSTAS 879
           L +  +KI+ES+ SLE EGL+YSTIDE+HYKST +
Sbjct: 240 LNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGN 274


Top