BLASTX nr result

ID: Scutellaria22_contig00021833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021833
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   181   7e-44
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              176   2e-42
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   171   4e-41
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   165   4e-39

>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  181 bits (458), Expect = 7e-44
 Identities = 83/114 (72%), Positives = 95/114 (83%)
 Frame = +3

Query: 18  YFTGSTDSWHRILDGVVHRDLALCALGGLISHLSRFMLNDAIRNGDIFSYEVYKGFLRMD 197
           YF GS +SW   LDGV+H DLALCALGGL+ HLSR  L+D +RNGDI  Y+VY G LRMD
Sbjct: 505 YFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMD 564

Query: 198 GQTLGNLEIFSNNADSGPSGTLYQYLNNCITSSGKRLLKNWICHPLQDVDKINS 359
           GQTL NLEIFSNNAD G SGTLY+YL+NC+TSSGKRLL+NWICHPL+DV  IN+
Sbjct: 565 GQTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINN 618


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/116 (71%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
 Frame = +3

Query: 18  YFTGSTDSWHRILDGVVHRDLALCALGGLISHLSRFMLNDAIRNGDIFSYEVYKGFLRMD 197
           YF GS +SW   LDGV+H DLALCALGGL+ HLSR  L+D +RNGDI  Y+VY G LRMD
Sbjct: 507 YFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMD 566

Query: 198 GQTLGNLEIFSNNADSGPSG--TLYQYLNNCITSSGKRLLKNWICHPLQDVDKINS 359
           GQTL NLEIFSNNAD G SG  TLY+YL+NC+TSSGKRLL+NWICHPL+DV  IN+
Sbjct: 567 GQTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINN 622


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/114 (71%), Positives = 93/114 (81%)
 Frame = +3

Query: 18  YFTGSTDSWHRILDGVVHRDLALCALGGLISHLSRFMLNDAIRNGDIFSYEVYKGFLRMD 197
           YF GS +SW   LDGV+H DLALCALGGL+ HLSR  L+D +RNGDI  Y+VY G LRMD
Sbjct: 477 YFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLKLDDTLRNGDILPYQVYSGCLRMD 536

Query: 198 GQTLGNLEIFSNNADSGPSGTLYQYLNNCITSSGKRLLKNWICHPLQDVDKINS 359
           GQTL NLEIFSNNAD    GTLY+YL+NC+TSSGKRLL+NWICHPL+DV  IN+
Sbjct: 537 GQTLVNLEIFSNNAD----GTLYKYLDNCVTSSGKRLLRNWICHPLKDVQGINN 586


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/121 (63%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = +3

Query: 3   IDSNRYFTGSTDSWHRILDGVVHRDLALCALGGLISHLSRFMLNDAIRNGDIFSYEVYKG 182
           I S  YF  ST+ W+  LD ++H+D++LCALGGLI HLSR M +D +RN DI  Y+VYKG
Sbjct: 490 IQSKDYFKWSTNPWNHALDSIMHQDISLCALGGLIGHLSRLMFDDVLRNADILPYQVYKG 549

Query: 183 FLRMDGQTLGNLEIFSNNADSGPSG--TLYQYLNNCITSSGKRLLKNWICHPLQDVDKIN 356
            LRMDGQTL NLE+FSN+AD G SG  TL+ YL+NC+TSSGKRLL+NWICHPL+ V+ IN
Sbjct: 550 CLRMDGQTLVNLEVFSNSADGGSSGQCTLFNYLDNCVTSSGKRLLRNWICHPLKHVEGIN 609

Query: 357 S 359
           +
Sbjct: 610 N 610


>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
           MSH7-like [Cucumis sativus]
          Length = 1095

 Score =  165 bits (417), Expect = 4e-39
 Identities = 75/119 (63%), Positives = 96/119 (80%)
 Frame = +3

Query: 3   IDSNRYFTGSTDSWHRILDGVVHRDLALCALGGLISHLSRFMLNDAIRNGDIFSYEVYKG 182
           + S  YF GS + W+   +  VH D+ALCALGGLI+H+SR ML+D +RNGD+  Y+VY+G
Sbjct: 493 VQSKAYFKGSLNLWNH--ESTVHDDIALCALGGLINHMSRLMLDDVLRNGDLLPYQVYRG 550

Query: 183 FLRMDGQTLGNLEIFSNNADSGPSGTLYQYLNNCITSSGKRLLKNWICHPLQDVDKINS 359
            LRMDGQT+ NLEIF NN D G SGTLY+YL+NC+TSSGKRLL+ WICHPL+DV++IN+
Sbjct: 551 CLRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINN 609


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