BLASTX nr result

ID: Scutellaria22_contig00021693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021693
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   1e-09
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
emb|CBI36234.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -1

Query: 246 SKVVRREISVRDTEHFHHFKDGICSCGDENYWGR 145
           SKVVRR ISVRDTE FHHFKDG+CSCGDE YWG+
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGDEGYWGK 871


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 246 SKVVRREISVRDTEHFHHFKDGICSCGDENYWGR 145
           S +VRREISVRD E +HHFKDG+CSCGDE YWG+
Sbjct: 841 STIVRREISVRDVEEYHHFKDGVCSCGDEGYWGK 874


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 246 SKVVRREISVRDTEHFHHFKDGICSCGDENYWGR 145
           S +VRREISVRD E +HHFKDG+CSCGDE YWG+
Sbjct: 841 STIVRREISVRDVEEYHHFKDGVCSCGDEGYWGK 874


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -1

Query: 246 SKVVRREISVRDTEHFHHFKDGICSCGDE 160
           SKVVRR ISVRDTE FHHFKDG+CSCGDE
Sbjct: 838 SKVVRRGISVRDTEQFHHFKDGVCSCGDE 866


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -1

Query: 246 SKVVRREISVRDTEHFHHFKDGICSCGD 163
           SK+VRREISVRDTE FHHFKDG+CSCGD
Sbjct: 778 SKIVRREISVRDTEQFHHFKDGLCSCGD 805


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