BLASTX nr result

ID: Scutellaria22_contig00021679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021679
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242596.1| uncharacterized protein LOC100780721 [Glycin...    98   8e-19
ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycin...    97   1e-18
ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative ...    94   2e-17
gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]                    93   2e-17
gb|ACF74354.1| putative mRNA export protein [Arachis hypogaea]         91   1e-16

>ref|NP_001242596.1| uncharacterized protein LOC100780721 [Glycine max]
           gi|255641855|gb|ACU21196.1| unknown [Glycine max]
          Length = 347

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/54 (79%), Positives = 48/54 (88%)
 Frame = +2

Query: 194 MATFGAASNANPNNSTEVVQAPTDSVSSLCFSPKANFLVATSWDNQVRCWEVMR 355
           M+TFGAA+N NPN S EV Q P+DS+SSLCFSPKANFLVATSWDNQVRCWE+ R
Sbjct: 1   MSTFGAAANTNPNKSYEVAQPPSDSISSLCFSPKANFLVATSWDNQVRCWEITR 54


>ref|NP_001242030.1| uncharacterized protein LOC100819240 [Glycine max]
           gi|255638763|gb|ACU19686.1| unknown [Glycine max]
          Length = 347

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/54 (77%), Positives = 48/54 (88%)
 Frame = +2

Query: 194 MATFGAASNANPNNSTEVVQAPTDSVSSLCFSPKANFLVATSWDNQVRCWEVMR 355
           M+TFGAA+N NPN S EV Q P+DS+SS+CFSPKANFLVATSWDNQVRCWE+ R
Sbjct: 1   MSTFGAAANTNPNKSYEVAQPPSDSISSICFSPKANFLVATSWDNQVRCWEITR 54


>ref|XP_002527320.1| plant poly(A)+ RNA export protein, putative [Ricinus communis]
           gi|223533320|gb|EEF35072.1| plant poly(A)+ RNA export
           protein, putative [Ricinus communis]
          Length = 349

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/56 (80%), Positives = 48/56 (85%), Gaps = 2/56 (3%)
 Frame = +2

Query: 194 MATFGAAS--NANPNNSTEVVQAPTDSVSSLCFSPKANFLVATSWDNQVRCWEVMR 355
           MATFGAA+  N NPN S EV Q P+DSVSSLCFSPKANFLVATSWDNQVRCWE+ R
Sbjct: 1   MATFGAAATANQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEITR 56


>gb|ABG29731.1| RNA export 1 [Nicotiana benthamiana]
          Length = 347

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/55 (80%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
 Frame = +2

Query: 194 MATFGAAS--NANPNNSTEVVQAPTDSVSSLCFSPKANFLVATSWDNQVRCWEVM 352
           M+ FGAA+  N NPN STEV Q P+DSVSSLCFSPKANFL+ATSWDNQVRCWEVM
Sbjct: 1   MSIFGAAAAANTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWDNQVRCWEVM 55


>gb|ACF74354.1| putative mRNA export protein [Arachis hypogaea]
          Length = 179

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = +2

Query: 194 MATFGAASNANPNNSTEVVQAPTDSVSSLCFSPKANFLVATSWDNQVRCWEVMR 355
           M+TFG+A N NPN S EV Q P DS+SSLCFSPKANFLVATSWDNQVRCWE+ R
Sbjct: 1   MSTFGSA-NTNPNKSYEVTQPPGDSISSLCFSPKANFLVATSWDNQVRCWEIAR 53


Top