BLASTX nr result

ID: Scutellaria22_contig00021383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021383
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    71   1e-10
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat...    71   1e-10
ref|XP_002866609.1| pentatricopeptide repeat-containing protein ...    70   1e-10

>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/69 (49%), Positives = 46/69 (66%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           LINGYC  G + EA  L+ E+  + +  TV+TYNT+L GLFREG+  D   LF EM+   
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 32  LSPDTVTYN 6
           L+P++ TYN
Sbjct: 444 LTPESCTYN 452



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 24/71 (33%), Positives = 47/71 (66%)
 Frame = -3

Query: 215 SLINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQAR 36
           +LI+G+C +G +++A  LF+ +  +G++   V+YN ++ G  + GR  +  KL++EM  +
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407

Query: 35  QLSPDTVTYNT 3
           ++ P  +TYNT
Sbjct: 408 EIMPTVITYNT 418


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/70 (42%), Positives = 46/70 (65%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           LING+CT G V+ A     ++  RG    +VTYN+++ GL + GR  + L LF+++QA  
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 32  LSPDTVTYNT 3
           + PD++TYNT
Sbjct: 658 IQPDSITYNT 667


>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -3

Query: 215 SLINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQAR 36
           SLING C  G++N A ++F E   +G KH+++ YNT++KGL ++G     L+L K+M   
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 35  QLSPDTVTYN 6
             SPD  TYN
Sbjct: 421 GCSPDIWTYN 430



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/70 (35%), Positives = 44/70 (62%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           LI+  C KGNV E+  LF ++ +RG+   + T+N  ++GL R+G   +  +L + + +  
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 32  LSPDTVTYNT 3
           L+PD ++YNT
Sbjct: 282 LTPDVISYNT 291


>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -3

Query: 215 SLINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQAR 36
           SLING C  G++N A ++F E   +G KH+++ YNT++KGL ++G     L+L K+M   
Sbjct: 361 SLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420

Query: 35  QLSPDTVTYN 6
             SPD  TYN
Sbjct: 421 GCSPDIWTYN 430



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/70 (35%), Positives = 44/70 (62%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           LI+  C KGNV E+  LF ++ +RG+   + T+N  ++GL R+G   +  +L + + +  
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 32  LSPDTVTYNT 3
           L+PD ++YNT
Sbjct: 282 LTPDVISYNT 291


>ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312444|gb|EFH42868.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 724

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/70 (48%), Positives = 45/70 (64%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           LING C  G V EA     E+  RG    +VT+N+++ GL R GR  DGL +F+++QA  
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658

Query: 32  LSPDTVTYNT 3
           + PDTVTYNT
Sbjct: 659 IPPDTVTYNT 668



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 22/70 (31%), Positives = 42/70 (60%)
 Frame = -3

Query: 212 LINGYCTKGNVNEAWSLFLEIPRRGLKHTVVTYNTMLKGLFREGRCADGLKLFKEMQARQ 33
           L++G+C  G ++EA++L  E+   GLK   V +N ++    +E R  + +++F+EM  + 
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 483

Query: 32  LSPDTVTYNT 3
             PD  T+N+
Sbjct: 484 CKPDVYTFNS 493


Top