BLASTX nr result

ID: Scutellaria22_contig00021216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021216
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   266   2e-69
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   266   2e-69
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   263   2e-68
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...   261   8e-68
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...   258   4e-67

>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  266 bits (679), Expect = 2e-69
 Identities = 134/191 (70%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6    IYVNIFSGEATTKFPTAMEMARGGILADAMGLGKTVMTIALILARRGRGIQEDQHIDVEA 185
            IYVNIFSGEATT+ PTA+ MARGGILADAMGLGKTVMTIALILAR GR       +  EA
Sbjct: 604  IYVNIFSGEATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLTEA 663

Query: 186  ESRTQDIRSRKGS-SQIFRKLKGGTLIVCPMALLSQWKDELEAHSKPDSITVFVHYGGNR 362
               T++      S ++    +KGGTLIVCPMALLSQWKDELE HSKP+SI++F+HYGG+R
Sbjct: 664  ADDTEEAEKNTDSHTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDR 723

Query: 363  TNDPKVIAEPDVVLTTYGVLTAAYKTDSVNSIFHSVEWHRVVLDEAHTIKSAKTQAAQAA 542
            TNDPKVI+E DVVLTTYGVLT+AYK D  +SIFH VEW+RVVLDEAHTIKS+KT +AQAA
Sbjct: 724  TNDPKVISEHDVVLTTYGVLTSAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLSAQAA 783

Query: 543  YKLSAYCRWCL 575
            + L ++CRWCL
Sbjct: 784  FALPSHCRWCL 794


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  266 bits (679), Expect = 2e-69
 Identities = 134/191 (70%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6    IYVNIFSGEATTKFPTAMEMARGGILADAMGLGKTVMTIALILARRGRGIQEDQHIDVEA 185
            IYVNIFSGEATT+ PTA+ MARGGILADAMGLGKTVMTIALILAR GR       +  EA
Sbjct: 621  IYVNIFSGEATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLTEA 680

Query: 186  ESRTQDIRSRKGS-SQIFRKLKGGTLIVCPMALLSQWKDELEAHSKPDSITVFVHYGGNR 362
               T++      S ++    +KGGTLIVCPMALLSQWKDELE HSKP+SI++F+HYGG+R
Sbjct: 681  ADDTEEAEKNTDSHTKAPLNVKGGTLIVCPMALLSQWKDELETHSKPESISIFIHYGGDR 740

Query: 363  TNDPKVIAEPDVVLTTYGVLTAAYKTDSVNSIFHSVEWHRVVLDEAHTIKSAKTQAAQAA 542
            TNDPKVI+E DVVLTTYGVLT+AYK D  +SIFH VEW+RVVLDEAHTIKS+KT +AQAA
Sbjct: 741  TNDPKVISEHDVVLTTYGVLTSAYKNDENSSIFHRVEWYRVVLDEAHTIKSSKTLSAQAA 800

Query: 543  YKLSAYCRWCL 575
            + L ++CRWCL
Sbjct: 801  FALPSHCRWCL 811


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  263 bits (672), Expect = 2e-68
 Identities = 130/190 (68%), Positives = 157/190 (82%)
 Frame = +3

Query: 6    IYVNIFSGEATTKFPTAMEMARGGILADAMGLGKTVMTIALILARRGRGIQEDQHIDVEA 185
            IYVNIFSGE+TTKFPTA +MARGGILADAMGLGKTVMTIALILAR G+G  ++Q   V  
Sbjct: 499  IYVNIFSGESTTKFPTATQMARGGILADAMGLGKTVMTIALILARMGKGCPDNQKSTVNK 558

Query: 186  ESRTQDIRSRKGSSQIFRKLKGGTLIVCPMALLSQWKDELEAHSKPDSITVFVHYGGNRT 365
            +  T+     K S +   K +GGTLIVCPMALL QWK+ELE HS+P+SI++FVHYGG+RT
Sbjct: 559  KVTTE-----KKSQKSTTKARGGTLIVCPMALLGQWKEELEIHSEPESISIFVHYGGDRT 613

Query: 366  NDPKVIAEPDVVLTTYGVLTAAYKTDSVNSIFHSVEWHRVVLDEAHTIKSAKTQAAQAAY 545
            N+P+V+   DVVLTTYGVLT+AYK+D   SI+H V+W+RVVLDEAHTIKS+KTQ AQAA+
Sbjct: 614  NNPEVLLGYDVVLTTYGVLTSAYKSDGEFSIYHRVDWYRVVLDEAHTIKSSKTQTAQAAF 673

Query: 546  KLSAYCRWCL 575
             L++YCRWCL
Sbjct: 674  TLNSYCRWCL 683


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
            gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
            Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3; Short=SMARCA3-like protein 3
            gi|10178192|dbj|BAB11616.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
            Helicase protein with RING/U-box domain [Arabidopsis
            thaliana]
          Length = 1277

 Score =  261 bits (666), Expect = 8e-68
 Identities = 132/192 (68%), Positives = 155/192 (80%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6    IYVNIFSGEATTKFPTAMEMARGGILADAMGLGKTVMTIALILARRGRGIQEDQHIDVEA 185
            IY+NIFSGEAT +FPTA +MARGGILADAMGLGKTVMTIALILAR GRG  E++  DV  
Sbjct: 660  IYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENE--DVLV 717

Query: 186  ESRTQDIRSRKGSSQIFR--KLKGGTLIVCPMALLSQWKDELEAHSKPDSITVFVHYGGN 359
                 D R+RK         K KGGTLI+CPMALLSQWKDELE HSKPD+++V V+YGG+
Sbjct: 718  ADVNADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGD 777

Query: 360  RTNDPKVIAEPDVVLTTYGVLTAAYKTDSVNSIFHSVEWHRVVLDEAHTIKSAKTQAAQA 539
            RT+D K IA  DVVLTTYGVLT+AYK D  NSIFH ++W+R+VLDEAHTIKS KTQAA+A
Sbjct: 778  RTHDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKA 837

Query: 540  AYKLSAYCRWCL 575
             ++LS++CRWCL
Sbjct: 838  TFELSSHCRWCL 849


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311253|gb|EFH41677.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score =  258 bits (660), Expect = 4e-67
 Identities = 130/193 (67%), Positives = 155/193 (80%), Gaps = 3/193 (1%)
 Frame = +3

Query: 6    IYVNIFSGEATTKFPTAMEMARGGILADAMGLGKTVMTIALILARRGRGIQEDQH---ID 176
            IY+NIFSGEAT +FPTA +MARGGILADAMGLGKTVMTIALILAR GRG   ++     D
Sbjct: 688  IYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPGNEDGLAAD 747

Query: 177  VEAESRTQDIRSRKGSSQIFRKLKGGTLIVCPMALLSQWKDELEAHSKPDSITVFVHYGG 356
            V A+ R    R    ++    K KGGTLI+CPMALLSQWKDELE HSKPD+++V V+YGG
Sbjct: 748  VNADKRK---RKESHTALTIVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVLVYYGG 804

Query: 357  NRTNDPKVIAEPDVVLTTYGVLTAAYKTDSVNSIFHSVEWHRVVLDEAHTIKSAKTQAAQ 536
            +RT+D K IA  DVVLTTYGVLT+AYK D  NSIFH ++W+R+VLDEAHTIKS KTQAA+
Sbjct: 805  DRTHDAKAIASHDVVLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAK 864

Query: 537  AAYKLSAYCRWCL 575
            A ++LS++CRWCL
Sbjct: 865  ATFELSSHCRWCL 877


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