BLASTX nr result

ID: Scutellaria22_contig00021022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021022
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...    81   1e-13
ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...    75   5e-12
ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago tru...    73   2e-11
ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arab...    73   2e-11
ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana] ...    73   2e-11

>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/43 (83%), Positives = 41/43 (95%)
 Frame = -2

Query: 129 NVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVK 1
           NVEKRIVRVLELAGG+MEE+ANP+GPRKE VN+HCSEFMQ +K
Sbjct: 15  NVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIK 57


>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 32/43 (74%), Positives = 40/43 (93%)
 Frame = -2

Query: 129 NVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVK 1
           NVEKRI++VLELAGG+M+E+ NPSGPRKEL++ HC EFMQL+K
Sbjct: 15  NVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIK 57


>ref|XP_003631035.1| Retinoblastoma-binding protein [Medicago truncatula]
           gi|355525057|gb|AET05511.1| Retinoblastoma-binding
           protein [Medicago truncatula]
          Length = 311

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/60 (58%), Positives = 45/60 (75%)
 Frame = -2

Query: 180 SAAMDXXXXXXXXXXXQNVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVK 1
           + +MD           QNVEKRIV+VLELAGG+M+E+A+P GPRK+LV +HC EFMQL+K
Sbjct: 116 ATSMDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDLVQNHCLEFMQLIK 175


>ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
           lyrata] gi|297328022|gb|EFH58441.1| hypothetical protein
           ARALYDRAFT_317046 [Arabidopsis lyrata subsp. lyrata]
          Length = 115

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = -2

Query: 129 NVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVK 1
           NVE R+V+VLELAGG+MEE+A+PSGP+KE VNSHC EFMQ +K
Sbjct: 15  NVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMK 57


>ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75123851|sp|Q6ID77.1|MED11_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           11 gi|48310228|gb|AAT41779.1| At3g01435 [Arabidopsis
           thaliana] gi|52218796|gb|AAU29468.1| At3g01435
           [Arabidopsis thaliana] gi|110738543|dbj|BAF01197.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332640145|gb|AEE73666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 115

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = -2

Query: 129 NVEKRIVRVLELAGGIMEEMANPSGPRKELVNSHCSEFMQLVK 1
           NVE R+V+VLELAGG+MEE+A+PSGP+KE VNSHC EFMQ +K
Sbjct: 15  NVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMK 57


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