BLASTX nr result

ID: Scutellaria22_contig00021021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00021021
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...   192   7e-47
ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   191   2e-46
ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana] ...   177   2e-42
ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arab...   177   3e-42
gb|AFK33474.1| unknown [Lotus japonicus]                              174   1e-41

>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  192 bits (488), Expect = 7e-47
 Identities = 88/115 (76%), Positives = 103/115 (89%)
 Frame = -3

Query: 526 MDPQIQNTSLQRLQNVEKRIVRVLELAGAIMEEMANPGGPRKELVNSHCSEFMQLVKDTQ 347
           MD Q  NTSLQRLQNVEKRI++VLELAG +M+E+ NP GPRKEL++ HC EFMQL+KD Q
Sbjct: 1   MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIKDIQ 60

Query: 346 MTLREEIKSACDYRPFEKCDYVPRITNEICCKKLEYVVAQLDEMKQTIDEYGDAV 182
           MTLR+EIKSAC+YRPFEKCDY+ RI+NEICCKKLEYV++QLD MK+TIDEY DAV
Sbjct: 61  MTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDEYHDAV 115


>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  191 bits (484), Expect = 2e-46
 Identities = 88/111 (79%), Positives = 100/111 (90%)
 Frame = -3

Query: 526 MDPQIQNTSLQRLQNVEKRIVRVLELAGAIMEEMANPGGPRKELVNSHCSEFMQLVKDTQ 347
           MDP   NTSLQRLQNVEKRIVRVLELAG +MEE+ANP GPRKE VN+HCSEFMQ +KD Q
Sbjct: 1   MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 346 MTLREEIKSACDYRPFEKCDYVPRITNEICCKKLEYVVAQLDEMKQTIDEY 194
           +TLR+EIKSAC+YRPFEKCDY  RITNE+CCKKLEY+V++LD MKQTID+Y
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDDY 111


>ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75123851|sp|Q6ID77.1|MED11_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           11 gi|48310228|gb|AAT41779.1| At3g01435 [Arabidopsis
           thaliana] gi|52218796|gb|AAU29468.1| At3g01435
           [Arabidopsis thaliana] gi|110738543|dbj|BAF01197.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332640145|gb|AEE73666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 115

 Score =  177 bits (449), Expect = 2e-42
 Identities = 82/111 (73%), Positives = 96/111 (86%)
 Frame = -3

Query: 526 MDPQIQNTSLQRLQNVEKRIVRVLELAGAIMEEMANPGGPRKELVNSHCSEFMQLVKDTQ 347
           MDPQ QNTSLQRLQNVE R+V+VLELAG +MEE+A+P GP+KE VNSHC EFMQ +KD Q
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 346 MTLREEIKSACDYRPFEKCDYVPRITNEICCKKLEYVVAQLDEMKQTIDEY 194
           +TLREEIKSAC+YRPFEKCDY  RI NEIC +KLEYV+ QL+++KQT D Y
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLEDLKQTADRY 111


>ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
           lyrata] gi|297328022|gb|EFH58441.1| hypothetical protein
           ARALYDRAFT_317046 [Arabidopsis lyrata subsp. lyrata]
          Length = 115

 Score =  177 bits (448), Expect = 3e-42
 Identities = 82/111 (73%), Positives = 96/111 (86%)
 Frame = -3

Query: 526 MDPQIQNTSLQRLQNVEKRIVRVLELAGAIMEEMANPGGPRKELVNSHCSEFMQLVKDTQ 347
           MDPQ QNTSLQRLQNVE R+V+VLELAG +MEE+A+P GP+KE VNSHC EFMQ +KD Q
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 346 MTLREEIKSACDYRPFEKCDYVPRITNEICCKKLEYVVAQLDEMKQTIDEY 194
           +TLREEIKSAC+YRPFEKCDY  RI NEIC +KLEYV+ QLD++KQT  +Y
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLDDLKQTAGQY 111


>gb|AFK33474.1| unknown [Lotus japonicus]
          Length = 115

 Score =  174 bits (442), Expect = 1e-41
 Identities = 83/115 (72%), Positives = 100/115 (86%)
 Frame = -3

Query: 526 MDPQIQNTSLQRLQNVEKRIVRVLELAGAIMEEMANPGGPRKELVNSHCSEFMQLVKDTQ 347
           MDPQ Q TSLQRLQNVEKRIV+VLELAG +M+E+A+P GPRK++V +HC EFMQL+KD Q
Sbjct: 1   MDPQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPLGPRKDVVQNHCLEFMQLIKDIQ 60

Query: 346 MTLREEIKSACDYRPFEKCDYVPRITNEICCKKLEYVVAQLDEMKQTIDEYGDAV 182
           + LR+EIKSAC+YRPFEKCDY  RI NEIC +K+E+V++QLD MKQTIDEY  AV
Sbjct: 61  VALRDEIKSACEYRPFEKCDYGSRIANEICYQKVEFVMSQLDAMKQTIDEYHAAV 115


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