BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020733
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              288   1e-75
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   281   1e-73
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   272   8e-71
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   263   4e-68
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   261   2e-67

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  288 bits (737), Expect = 1e-75
 Identities = 155/291 (53%), Positives = 191/291 (65%), Gaps = 13/291 (4%)
 Frame = -2

Query: 834 DRSQHLVWDSRKTHLYYSHVCQDGSYYFKGPYLNSSTTHLQRSLGDDNILTVKFEDGAYD 655
           DR +   WDS KTH+Y+ HV  DGSY FKGPYLN + THLQR LGD+NIL VKF +   D
Sbjct: 162 DRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAEDVTD 221

Query: 654 T-------------RKIAEEGIFVGLRRYQFFVFKDERKKVKKNQSGDKKATNSGVKCYF 514
                          KIA EGIFVGLR+Y+FFVFKD  K+ KK      K   S VKCYF
Sbjct: 222 RSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKK------KNPTSSVKCYF 275

Query: 513 VHTDRHGHDEQYILSRKSISEARCMFMHIHTLLTIEKYMARFSLILSKTRKLEVDFAAVI 334
           V        E   LS K++ EARC+FMH H + ++ KYMARFSLILSKT KL+VD + V 
Sbjct: 276 VFM------ESSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVN 329

Query: 333 VEIIDDIPFKDENGSIICDEDGKPILHTDGTGYVSEDLAMKCPKEFCGAKHTRDGSFEDI 154
           ++ IDD P +DE+G ++ DED KP++ TDGTG++SEDLA++CP   C  K+  +G+ +  
Sbjct: 330 IQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSD-- 387

Query: 153 ACQGGIGAMNKDPPLLMQCRLFHDGYAVKGTLLLNRKLAPGTIQIRPSMIK 1
                        PLL+QCRLF++G AVKGTLLLNRKL P TIQIRPSMIK
Sbjct: 388 -------------PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIK 425


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score =  281 bits (719), Expect = 1e-73
 Identities = 155/299 (51%), Positives = 192/299 (64%), Gaps = 21/299 (7%)
 Frame = -2

Query: 834 DRSQHLVWDSRKTHLYYSHVCQDGSYYFK--------GPYLNSSTTHLQRSLGDDNILTV 679
           DR +   WDS KTH+Y+ HV  DGSY FK        GPYLN + THLQR LGD+NIL V
Sbjct: 162 DRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENILLV 221

Query: 678 KFEDGAYDT-------------RKIAEEGIFVGLRRYQFFVFKDERKKVKKNQSGDKKAT 538
           KF +   D               KIA EGIFVGLR+Y+FFVFKD  K+ KK      K  
Sbjct: 222 KFAEDVTDRSSLNCSTDSNASYNKIAREGIFVGLRQYRFFVFKDGGKEEKK------KNP 275

Query: 537 NSGVKCYFVHTDRHGHDEQYILSRKSISEARCMFMHIHTLLTIEKYMARFSLILSKTRKL 358
            S VKCYFV        E   LS K++ EARC+FMH H + ++ KYMARFSLILSKT KL
Sbjct: 276 TSSVKCYFVFM------ESSALSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKL 329

Query: 357 EVDFAAVIVEIIDDIPFKDENGSIICDEDGKPILHTDGTGYVSEDLAMKCPKEFCGAKHT 178
           +VD + V ++ IDD P +DE+G ++ DED KP++ TDGTG++SEDLA++CP   C  K+ 
Sbjct: 330 DVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYM 389

Query: 177 RDGSFEDIACQGGIGAMNKDPPLLMQCRLFHDGYAVKGTLLLNRKLAPGTIQIRPSMIK 1
            +G+ +           +   PLL+QCRLF++G AVKGTLLLNRKL P TIQIRPSMIK
Sbjct: 390 NNGNSD---------VCDSRYPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIK 439


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  272 bits (695), Expect = 8e-71
 Identities = 145/287 (50%), Positives = 181/287 (63%), Gaps = 14/287 (4%)
 Frame = -2

Query: 819  LVWDSRKTHLYYSHVCQDGSYYFKGPYLNSSTTHLQRSLGDDNILTVKF----------- 673
            L WDS KTH Y  HV  DGSY FKGP L  + THL + LGD+N+LTVKF           
Sbjct: 205  LQWDSGKTHYYQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDENVLTVKFADVPKNSSTYS 264

Query: 672  EDGAYDTRKIAEEGIFVGLRRYQFFVFKDERKKVKKNQSGDKKATNSGVKCYFVHTDRHG 493
             D  +  ++IA+ GI +GLRRYQFFVFKD  K+ KK     KK     VKCYF+ TD   
Sbjct: 265  NDRYFTYKEIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKK-----VKCYFIRTDSTA 319

Query: 492  H---DEQYILSRKSISEARCMFMHIHTLLTIEKYMARFSLILSKTRKLEVDFAAVIVEII 322
                +  YI + KSI EAR  FMH+H   T+  YMARFSLILSKT+ LEVD   +  + I
Sbjct: 320  SCDMENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPI 379

Query: 321  DDIPFKDENGSIICDEDGKPILHTDGTGYVSEDLAMKCPKEFCGAKHTRDGSFEDIACQG 142
            DDI   D++G  + D++ KP +H+DGTGY+SEDLA  CP      K  R  + ++     
Sbjct: 380  DDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENIQE----- 434

Query: 141  GIGAMNKDPPLLMQCRLFHDGYAVKGTLLLNRKLAPGTIQIRPSMIK 1
               A N+DPPLL+Q R+F+DGYAVKGT LLN+KL P T+Q+RPSMIK
Sbjct: 435  ---ACNQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIK 478


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  263 bits (672), Expect = 4e-68
 Identities = 153/305 (50%), Positives = 195/305 (63%), Gaps = 30/305 (9%)
 Frame = -2

Query: 825  QHLVWDSRKTHLYYSHVCQDGSYYFKGPYLNSSTTHLQRSLGDDNILTVKFEDGAYDT-- 652
            Q++ WD RKTH+Y+ HV  DGS  FKGP+LN++ THLQR LGDDN+L VKF +   DT  
Sbjct: 255  QYVDWDRRKTHIYHCHVALDGSCRFKGPFLNNTKTHLQRVLGDDNVLMVKFAEDKSDTPL 314

Query: 651  -----------RKIAEEGIFVGLRRYQFFVFKDERKKVKKNQSGDKKATNSGVKCYFVHT 505
                        KIA +GI +GLRRY FFVFKD  K+ KK     K  T S VKCYFV  
Sbjct: 315  SNHSGGSFYAYSKIARDGILLGLRRYHFFVFKDGGKEEKK-----KNPTTSAVKCYFVRM 369

Query: 504  DRHGH---DEQYILSRKSISEARCMFMHIHTLLTIEKYMARFSLILSKTRKLEVDFAAVI 334
            +   +    E Y LS +++ EAR +FMH H + +I  YMARFSLILSKT  L++D + V 
Sbjct: 370  ESDAYIDKIEPYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVN 429

Query: 333  VEIIDDIPFKDENGSIICDEDGKPILHTDGTGYVSEDLAMKCPKE-FCG-AKHTRD---- 172
            V+ I DIP KD  G++I   DGKP++HTDGTG++SEDLA++CP   F G AKH  D    
Sbjct: 430  VQRIGDIPCKDIYGNVIY-RDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAI 488

Query: 171  -------GSFEDIACQGGI-GAMNKDPPLLMQCRLFHDGYAVKGTLLLNRKLAPGTIQIR 16
                     F++   Q  + G   ++PPLL+Q RLF++G AVKGT LLN++L P TIQIR
Sbjct: 489  WQRIPAFEGFQNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIR 548

Query: 15   PSMIK 1
             SMIK
Sbjct: 549  DSMIK 553


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  261 bits (666), Expect = 2e-67
 Identities = 150/293 (51%), Positives = 183/293 (62%), Gaps = 20/293 (6%)
 Frame = -2

Query: 819  LVWDSRKTHLYYSHVCQDGSYYFK------GPYLNSSTTHLQRSLGDDNILTVKFED--- 667
            L WDS KTH Y  +V  +GSY FK      GP L  + THL + LGDDN+LTVKF D   
Sbjct: 195  LQWDSGKTHYYQCNVAPNGSYTFKVLSALQGPLLEHTGTHLHKVLGDDNVLTVKFADVQK 254

Query: 666  -------GAYDTRK-IAEEGIFVGLRRYQFFVFKDERKKVKKNQSGDKKATNSGVKCYFV 511
                     Y T K IA+ GI +GLRRYQFFVFKD  K+ KK     KK     VKCYF+
Sbjct: 255  SSSTYSIDHYFTYKGIAKNGIMIGLRRYQFFVFKDGGKEEKKKDLSTKK-----VKCYFI 309

Query: 510  HTDRHG-HDEQ--YILSRKSISEARCMFMHIHTLLTIEKYMARFSLILSKTRKLEVDFAA 340
             TD    +D Q  YIL+ KSI EAR  FMH+H   T+  YMARFSLILSKT+ LEVD   
Sbjct: 310  RTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTG 369

Query: 339  VIVEIIDDIPFKDENGSIICDEDGKPILHTDGTGYVSEDLAMKCPKEFCGAKHTRDGSFE 160
            +  + IDDI   D++G  + D++ KP +H+DGTGY+SEDLA  CP      K  R  S +
Sbjct: 370  ITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQ 429

Query: 159  DIACQGGIGAMNKDPPLLMQCRLFHDGYAVKGTLLLNRKLAPGTIQIRPSMIK 1
            +        A  +DPPLL+Q R+F+DGYAVKGT LLN+KL P T+Q+RPSMIK
Sbjct: 430  E--------ACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIK 474