BLASTX nr result

ID: Scutellaria22_contig00020563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020563
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   130   1e-28
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
emb|CBI29340.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/90 (64%), Positives = 76/90 (84%)
 Frame = -2

Query: 274 CNAVIDMYAKCGMVEKAYSMFEDMKCSRSLITWNSMIMAFAMDGNGMKALELFNLIARGG 95
           CN VIDMYAKCG ++KAY +FE+M+C +SLITWN+MIMAFAM G+G KAL+LF  + R G
Sbjct: 243 CNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSG 302

Query: 94  EDLAPDSVSYLTALCACNHAGMVDEGVRLF 5
             ++PD+VSYL  LCACNHAG+V++G++LF
Sbjct: 303 --MSPDAVSYLAVLCACNHAGLVEDGLKLF 330


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/90 (64%), Positives = 76/90 (84%)
 Frame = -2

Query: 274 CNAVIDMYAKCGMVEKAYSMFEDMKCSRSLITWNSMIMAFAMDGNGMKALELFNLIARGG 95
           CN VIDMYAKCG ++KAY +FE+M+C +SLITWN+MIMAFAM G+G KAL+LF  + R G
Sbjct: 243 CNVVIDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSG 302

Query: 94  EDLAPDSVSYLTALCACNHAGMVDEGVRLF 5
             ++PD+VSYL  LCACNHAG+V++G++LF
Sbjct: 303 --MSPDAVSYLAVLCACNHAGLVEDGLKLF 330


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/90 (63%), Positives = 69/90 (76%)
 Frame = -2

Query: 274 CNAVIDMYAKCGMVEKAYSMFEDMKCSRSLITWNSMIMAFAMDGNGMKALELFNLIARGG 95
           CN VIDMYAKCG V+KAY +FE M C + ++TWN+MIMAFAM G G KALELF  + + G
Sbjct: 244 CNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSG 303

Query: 94  EDLAPDSVSYLTALCACNHAGMVDEGVRLF 5
             ++PD VSYL  LCACNH G+V+EG RLF
Sbjct: 304 --VSPDDVSYLAVLCACNHGGLVEEGFRLF 331


>emb|CBI29340.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = -2

Query: 274 CNAVIDMYAKCGMVEKAYSMFEDMKCSRSLITWNSMIMAFAMDGNGMKALELFNLIARGG 95
           CNAVIDMYAKCG  +K + +F  M C +S++TWN+MIMAFAM G+G +ALELF     G 
Sbjct: 175 CNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFE--EMGK 232

Query: 94  EDLAPDSVSYLTALCACNHAGMVDEGVRLFE 2
             +  DSV+YL  LCACNHAG+V+EGVRLF+
Sbjct: 233 TQVEMDSVTYLAVLCACNHAGLVEEGVRLFD 263


>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/91 (60%), Positives = 69/91 (75%)
 Frame = -2

Query: 274 CNAVIDMYAKCGMVEKAYSMFEDMKCSRSLITWNSMIMAFAMDGNGMKALELFNLIARGG 95
           CNAVIDMYAKCG  +K + +F  M C +S++TWN+MIMAFAM G+G +ALELF     G 
Sbjct: 239 CNAVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFE--EMGK 296

Query: 94  EDLAPDSVSYLTALCACNHAGMVDEGVRLFE 2
             +  DSV+YL  LCACNHAG+V+EGVRLF+
Sbjct: 297 TQVEMDSVTYLAVLCACNHAGLVEEGVRLFD 327


Top