BLASTX nr result

ID: Scutellaria22_contig00020350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020350
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16054.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37

>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/115 (69%), Positives = 96/115 (83%)
 Frame = -1

Query: 349 DSIQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMPSDRFTYTYTL 170
           DSI +AR+VFD+   RTIYVWNA+FRAL+L+GYG EVLDLYR+MN IG+PSDRFTYTY L
Sbjct: 127 DSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVL 186

Query: 169 KACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           KACV SE  +     G+EIH H+LRHG+E +VHIMTTL+DMYA+FGCV  A+RVF
Sbjct: 187 KACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVF 241


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/116 (69%), Positives = 100/116 (86%)
 Frame = -1

Query: 349 DSIQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMPSDRFTYTYTL 170
           DSI +AR+VFD+  +RTIYV+NA+FRALSL+G+GEEVL++YR+MN IG+PSDRFTYTY L
Sbjct: 119 DSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVL 178

Query: 169 KACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVFS 2
           KACV SE  +    +G+EIHAH+LRHGY+ YVHIMTTLVDMYAKFGCV  A+ VF+
Sbjct: 179 KACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFN 234



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/115 (28%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -1

Query: 343 IQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLI--GMPSDRFTYTYTL 170
           + +A  VF+++  + +  W+A+    + +G   E L+L+R++ L    +  +  T    L
Sbjct: 226 VSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVL 285

Query: 169 KACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           +AC      L +  +G+ IH ++LR G +S + +++ LV MYA+ G +E+  RVF
Sbjct: 286 QACAA----LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVF 336


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/115 (69%), Positives = 96/115 (83%)
 Frame = -1

Query: 349 DSIQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMPSDRFTYTYTL 170
           DSI +AR+VFD+   RTIYVWNA+FRAL+L+GYG EVLDLYR+MN IG+PSDRFTYTY L
Sbjct: 127 DSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVL 186

Query: 169 KACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           KACV SE  +     G+EIH H+LRHG+E +VHIMTTL+DMYA+FGCV  A+RVF
Sbjct: 187 KACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVF 241



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = -1

Query: 343 IQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMP--SDRFTYTYTL 170
           + +A +VFD++  + +  W+A+    S +G   E L+L+RKM L       +  T    L
Sbjct: 234 VLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVL 293

Query: 169 KACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           +AC      L +  +GK +H ++LR G +S + +++ LV +YA+ G +E+ +RVF
Sbjct: 294 QACAA----LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVF 344


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/114 (66%), Positives = 93/114 (81%)
 Frame = -1

Query: 346 SIQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMPSDRFTYTYTLK 167
           SI  AR+VFDE   RTIYVWNA+FRAL++ G G+E+LDLY +MN IG+PSDRFTYT+ LK
Sbjct: 128 SIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLK 187

Query: 166 ACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           ACVVSE  +    +GKEIHAH+LRHGYE+ +H+MTTL+D+YAKFG V  AN VF
Sbjct: 188 ACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVF 241


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/114 (66%), Positives = 92/114 (80%)
 Frame = -1

Query: 346 SIQHARQVFDEITHRTIYVWNAIFRALSLSGYGEEVLDLYRKMNLIGMPSDRFTYTYTLK 167
           SI  A +VFDE   RTIYVWNA+FRAL++ G+G+E+LDLY +MN IG PSDRFTYTY LK
Sbjct: 128 SIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLK 187

Query: 166 ACVVSEDRLYSAWRGKEIHAHVLRHGYESYVHIMTTLVDMYAKFGCVEIANRVF 5
           ACVVSE  +    +GKEIHAH+LRHGYE+ +H+MTTL+D+YAKFG V  AN VF
Sbjct: 188 ACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVF 241


Top