BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020186
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   265   1e-68
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-...   260   2e-67
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   257   2e-66
ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis t...   256   3e-66
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   250   2e-64

>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  265 bits (676), Expect = 1e-68
 Identities = 147/233 (63%), Positives = 171/233 (73%), Gaps = 9/233 (3%)
 Frame = +1

Query: 103 MGKQKQQVISRFFAPKP-NPSTSVXXXXXXXXXXXXXXXXXXVSFSAAKRLRTDQINSL- 276
           MGKQKQQVISRFFAPKP +PS S                   V+FS +KRL +  I S  
Sbjct: 1   MGKQKQQVISRFFAPKPKSPSLS-------SSSSSPAKVSATVTFSPSKRLISSAIASQL 53

Query: 277 ----RSKHAKLTHPSTTDNPVTPLPNPTLHQKFLAKLLEPPHDLLEPSRSS---SSAQVS 435
                SK  KL+    T NP+  +PNP+LHQ+FL KLLEP  D  +PS  +   S+    
Sbjct: 54  TPPKSSKRPKLS--PHTHNPLPSIPNPSLHQRFLDKLLEPTDDSFQPSNQNPRTSNGADP 111

Query: 436 NPKHTPLEQQVVELKHRYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASV 615
             K+TPLEQQVV+LK RYPDVLLM+EVGY+YRFFG+DA  AARVLGIYAH+DHNF+TAS+
Sbjct: 112 KYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAHLDHNFMTASI 171

Query: 616 PTFRLHFHVRRLVSAGYKVGVVKQTETAAIKSHGANRLGPFCRGLSALYTKAT 774
           PTFRL+ HVRRLVSAGYKVGVVKQTETAAIK+HG+N+LGPFCRGLSALYTKAT
Sbjct: 172 PTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKAT 224


>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 966

 Score =  260 bits (665), Expect = 2e-67
 Identities = 144/243 (59%), Positives = 170/243 (69%), Gaps = 19/243 (7%)
 Frame = +1

Query: 103 MGKQKQQVISRFFAPKP-----------NPSTSVXXXXXXXXXXXXXXXXXXVSFSAAKR 249
           MGKQKQQVISRFFAPKP           + S +                   V+FS +KR
Sbjct: 1   MGKQKQQVISRFFAPKPKSPSLSSSSSSSSSATAADITPPTQPFSPAKVSATVTFSPSKR 60

Query: 250 LRTDQINSL-----RSKHAKLTHPSTTDNPVTPLPNPTLHQKFLAKLLEPPHDLLEPSRS 414
           L +  I S       SK  KL+    T NP+  +PNP+LHQ+FL +LLEP  D  +PS  
Sbjct: 61  LISSAIASQLTPPKSSKRPKLS--PHTHNPLPSIPNPSLHQRFLDRLLEPTDDSFQPSNQ 118

Query: 415 S---SSAQVSNPKHTPLEQQVVELKHRYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAH 585
           +   S+      K+TPLEQQVV+LK RYPDVLLM+EVGY+YRFFG+DA  AARVLGIYAH
Sbjct: 119 NPRTSNGADPKYKYTPLEQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYAH 178

Query: 586 MDHNFLTASVPTFRLHFHVRRLVSAGYKVGVVKQTETAAIKSHGANRLGPFCRGLSALYT 765
           +DHNF+TAS+PTFRL+ HVRRLVSAGYKVGVVKQTETAAIK+HG+N+LGPFCRGLSALYT
Sbjct: 179 LDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYT 238

Query: 766 KAT 774
           KAT
Sbjct: 239 KAT 241


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
           lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
           ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  257 bits (656), Expect = 2e-66
 Identities = 143/225 (63%), Positives = 164/225 (72%), Gaps = 1/225 (0%)
 Frame = +1

Query: 103 MGKQKQQVISRFFAPKPNPSTSVXXXXXXXXXXXXXXXXXXVSFSAAKR-LRTDQINSLR 279
           MGKQKQQ ISRFFAPKP   T                    VSFS +KR L +D + +  
Sbjct: 1   MGKQKQQTISRFFAPKPKSPTQ-EPNPVPESSTPPPKISATVSFSPSKRKLLSDHLAAAS 59

Query: 280 SKHAKLTHPSTTDNPVTPLPNPTLHQKFLAKLLEPPHDLLEPSRSSSSAQVSNPKHTPLE 459
            K  KL+ P T +    P+P+P LHQ+FL + LEP  +   P  SSSS      K+TPLE
Sbjct: 60  PKKPKLS-PHTQN----PIPDPNLHQRFLQRFLEPSPEESVPETSSSSR-----KYTPLE 109

Query: 460 QQVVELKHRYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLHFH 639
           QQVVELK +YPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDH+F+TASVPTFRL+FH
Sbjct: 110 QQVVELKRKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVPTFRLNFH 169

Query: 640 VRRLVSAGYKVGVVKQTETAAIKSHGANRLGPFCRGLSALYTKAT 774
           VRRLV+AGYK+GVVKQTETAAIKSHGANR GPF RGLSALYTKAT
Sbjct: 170 VRRLVNAGYKIGVVKQTETAAIKSHGANRSGPFFRGLSALYTKAT 214


>ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
           gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
           mismatch repair protein MSH3; Short=AtMSH3; AltName:
           Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
           Msh3 protein [Arabidopsis thaliana]
           gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
           Msh3 [Arabidopsis thaliana]
          Length = 1081

 Score =  256 bits (655), Expect = 3e-66
 Identities = 144/225 (64%), Positives = 162/225 (72%), Gaps = 1/225 (0%)
 Frame = +1

Query: 103 MGKQKQQVISRFFAPKPNPSTSVXXXXXXXXXXXXXXXXXXVSFSAAKR-LRTDQINSLR 279
           MGKQKQQ ISRFFAPKP   T                    VSFS +KR L +D + +  
Sbjct: 1   MGKQKQQTISRFFAPKPKSPTH-EPNPVAESSTPPPKISATVSFSPSKRKLLSDHLAAAS 59

Query: 280 SKHAKLTHPSTTDNPVTPLPNPTLHQKFLAKLLEPPHDLLEPSRSSSSAQVSNPKHTPLE 459
            K  KL+    T NPV   P+P LHQ+FL + LEP  +   P  SSS       K+TPLE
Sbjct: 60  PKKPKLS--PHTQNPV---PDPNLHQRFLQRFLEPSPEEYVPETSSSR------KYTPLE 108

Query: 460 QQVVELKHRYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNFLTASVPTFRLHFH 639
           QQVVELK +YPDV+LM+EVGY+YRFFGEDAE AARVLGIYAHMDHNF+TASVPTFRL+FH
Sbjct: 109 QQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVPTFRLNFH 168

Query: 640 VRRLVSAGYKVGVVKQTETAAIKSHGANRLGPFCRGLSALYTKAT 774
           VRRLV+AGYK+GVVKQTETAAIKSHGANR GPF RGLSALYTKAT
Sbjct: 169 VRRLVNAGYKIGVVKQTETAAIKSHGANRTGPFFRGLSALYTKAT 213


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  250 bits (639), Expect = 2e-64
 Identities = 140/253 (55%), Positives = 166/253 (65%), Gaps = 14/253 (5%)
 Frame = +1

Query: 103 MGKQKQQVISRFFAPKP------------NPSTSVXXXXXXXXXXXXXXXXXXVSFSAAK 246
           MGKQKQQVISRFFAPKP            +PS S                   V+FS +K
Sbjct: 1   MGKQKQQVISRFFAPKPKAPSSSSSSIPSSPSPSPSPSSLPNPPTPPPKISTTVTFSPSK 60

Query: 247 RLRTDQINSLRS--KHAKLTHPSTTDNPVTPLPNPTLHQKFLAKLLEPPHDLLEPSRSSS 420
           RL +  ++      K  K++HP           +P+LHQKF+ KLLEP       S + +
Sbjct: 61  RLPSSHVSPSTKPPKAPKISHPI----------DPSLHQKFVQKLLEPS------SSTPT 104

Query: 421 SAQVSNPKHTPLEQQVVELKHRYPDVLLMIEVGYKYRFFGEDAENAARVLGIYAHMDHNF 600
              +   K+TPLEQQVV+LK +YPDVLLM+EVGY+YRFFGEDAE AARVLGIYAH+DHNF
Sbjct: 105 KLPLPTTKYTPLEQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNF 164

Query: 601 LTASVPTFRLHFHVRRLVSAGYKVGVVKQTETAAIKSHGANRLGPFCRGLSALYTKATXX 780
           LTAS+PTFRL+ HVRRLVSAG+KVGVVKQTETAAIK+HG+N+LGPFCRGLSALYTKAT  
Sbjct: 165 LTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLSALYTKATLE 224

Query: 781 XXXXXXXXXXXCG 819
                      CG
Sbjct: 225 AAEEVGGGEEECG 237