BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020164
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   145   3e-33
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ...   145   4e-33
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
           gi|449530101|ref|XP_004172035.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Cucumis sativus]
          Length = 680

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/131 (58%), Positives = 99/131 (75%), Gaps = 5/131 (3%)
 Frame = +1

Query: 82  KRRTQFTVF--AFSSPAKDVWRRQNLVPPSPIEIGPPEHHR---RKHNSGFIDHSVDMDE 246
           K RT+  +F  + SS +KD+WRRQ     S   + P ++ R   R   S  +DHS+DMDE
Sbjct: 39  KPRTRIPIFTASSSSTSKDIWRRQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDE 98

Query: 247 LLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRSLALLDWMNEEALYTPS 426
           LL+SI QT +E +L++++S YKGR LS+RFMV+LLSRE DWQRSLA+LDW+NEEALYTPS
Sbjct: 99  LLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPS 158

Query: 427 VFAYNVVLRNV 459
           V+AYNVVLRNV
Sbjct: 159 VYAYNVVLRNV 169


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  145 bits (367), Expect = 3e-33
 Identities = 85/151 (56%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
 Frame = +1

Query: 22  PLSLPCFTFTSI-LELSENVKKRRTQFTVFAFSSPA----KDVWRRQNLVPPSPIEIGPP 186
           PL+ P   +TSI        ++R   FTV A SS      K VWR+Q     +       
Sbjct: 17  PLTRP-HIYTSIPFSTIPEARQRNLIFTVSASSSSESTQNKKVWRKQP-EKNTTSSFQAL 74

Query: 187 EHHRRKHNSGFIDHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPD 366
             HRR   S F+DH+VDMDELL+SIHQT +E +LF+L+S YK R LS+RFMV+LLSRE D
Sbjct: 75  RKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSREND 134

Query: 367 WQRSLALLDWMNEEALYTPSVFAYNVVLRNV 459
           WQRSLALLDW++EEA YTPSVFAYNVVLRNV
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNV 165


>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  145 bits (366), Expect = 3e-33
 Identities = 80/139 (57%), Positives = 97/139 (69%), Gaps = 2/139 (1%)
 Frame = +1

Query: 49  TSILELSENVKKRRTQFTVFAFSSPAKDVWRRQNLVPPSPIEI--GPPEHHRRKHNSGFI 222
           T+I       +K R  F +    S  KDVWRR   +P     +     +H  RK     +
Sbjct: 33  TNIFSPFNKTQKHRACFILV---SVFKDVWRR---LPDETTSLLSSSRQHRPRKQRVVHL 86

Query: 223 DHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRSLALLDWMN 402
           DHSVDMDELL+SI QTS+E +L++LMS YKGR LS+RFMV+LLSREPDWQRSLALLDW+N
Sbjct: 87  DHSVDMDELLASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDWQRSLALLDWIN 146

Query: 403 EEALYTPSVFAYNVVLRNV 459
           EEA Y+PSVFAYNVV+RNV
Sbjct: 147 EEASYSPSVFAYNVVIRNV 165


>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316573|gb|EFH46996.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 680

 Score =  145 bits (365), Expect = 4e-33
 Identities = 82/147 (55%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
 Frame = +1

Query: 37  CFTFTSILELSENVKKRRTQFTVFAFSSPA------KDVWRRQNLVPPSPIEIGPPEHHR 198
           C  F++I E     ++R   F V A SS +      K VWR+Q     +         HR
Sbjct: 26  CIPFSTIPE----ARQRNLIFKVSASSSSSSPSTQTKKVWRKQP-EKNTTSSFQALRKHR 80

Query: 199 RKHNSGFIDHSVDMDELLSSIHQTSDEHQLFALMSLYKGRCLSVRFMVTLLSREPDWQRS 378
           R   S F+DH+VDMDELL+SIHQT +E +LF+L+S YK R LS+RFMV+LLSRE DWQRS
Sbjct: 81  RYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRS 140

Query: 379 LALLDWMNEEALYTPSVFAYNVVLRNV 459
           LALLDW++EEA YTPSVFAYNVVLRNV
Sbjct: 141 LALLDWVHEEAKYTPSVFAYNVVLRNV 167


>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/117 (55%), Positives = 86/117 (73%)
 Frame = +1

Query: 109 AFSSPAKDVWRRQNLVPPSPIEIGPPEHHRRKHNSGFIDHSVDMDELLSSIHQTSDEHQL 288
           A ++ AKDVW R +    S          +R     + D SVDM+ELL++I QT +E +L
Sbjct: 38  AATAMAKDVWTRTSSSNTS---------RQRSRRQQYWDRSVDMEELLAAIGQTQNEDEL 88

Query: 289 FALMSLYKGRCLSVRFMVTLLSREPDWQRSLALLDWMNEEALYTPSVFAYNVVLRNV 459
           +A+MS Y GR LS+RFMV+LLSREPDWQR+LALLDW+N++ALY+PS+FAYNV+LRNV
Sbjct: 89  YAVMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYSPSLFAYNVLLRNV 145