BLASTX nr result

ID: Scutellaria22_contig00020120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020120
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifer...   196   3e-48
ref|XP_002514798.1| conserved hypothetical protein [Ricinus comm...   195   7e-48
ref|XP_003608429.1| Ycf20-like protein [Medicago truncatula] gi|...   184   2e-44
gb|AFK43635.1| unknown [Medicago truncatula]                          182   4e-44
ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|2...   182   6e-44

>ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifera]
           gi|298205056|emb|CBI38352.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  196 bits (499), Expect = 3e-48
 Identities = 109/178 (61%), Positives = 119/178 (66%), Gaps = 2/178 (1%)
 Frame = +2

Query: 35  RKSSLSSRHGWRTVFALNTDGFTANNDQDNPNGDSSVLGETRLGRIVSAGGRQLLSKLNS 214
           RKS  + RHGW+T FAL+T G   N  Q+N NG+   LG+TRLGRIVSAGGRQLL+KLNS
Sbjct: 76  RKSFQTRRHGWKTAFALDTGGIPDNGGQENLNGNGPDLGQTRLGRIVSAGGRQLLAKLNS 135

Query: 215 ARKNFPMKVFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKR--PMSP 388
           ARKNFPMKVFLLLLGFYTANALATILGQTGDWD          IEGIGML+YK+    S 
Sbjct: 136 ARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLVYKKSSSQST 195

Query: 389 GRMQSLVVMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGVCLGLFVDAFKLG 562
           GR+QSLVVMIN                              WKAGVCLGLFVDAFKLG
Sbjct: 196 GRLQSLVVMIN-----------------------------YWKAGVCLGLFVDAFKLG 224


>ref|XP_002514798.1| conserved hypothetical protein [Ricinus communis]
           gi|223545849|gb|EEF47352.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score =  195 bits (496), Expect = 7e-48
 Identities = 112/192 (58%), Positives = 122/192 (63%), Gaps = 5/192 (2%)
 Frame = +2

Query: 2   RHTPKLDLTS---YRKSSLSSRHGWRTVFALNTDGFTANNDQDNPNGDSSVLGETRLGRI 172
           R  PK+ L S    RK    S   WR  FAL+T G + N  ++N +GDSS LG TRLGRI
Sbjct: 38  RQIPKIGLKSASFLRKRFKLSGQDWRIPFALDTGGISGNGGEENLDGDSSGLGSTRLGRI 97

Query: 173 VSAGGRQLLSKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEG 352
           VSAGGRQLL KLNSARKNFPMK+FLLLLGFYTANALATILGQTGDWD          IEG
Sbjct: 98  VSAGGRQLLQKLNSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEG 157

Query: 353 IGMLMYKRPMSP--GRMQSLVVMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGV 526
           IGMLMYK+P SP  GR+QS VVM+N                              WKAGV
Sbjct: 158 IGMLMYKKPTSPSTGRLQSFVVMMN-----------------------------YWKAGV 188

Query: 527 CLGLFVDAFKLG 562
           CLGLFVDAFKLG
Sbjct: 189 CLGLFVDAFKLG 200


>ref|XP_003608429.1| Ycf20-like protein [Medicago truncatula]
           gi|355509484|gb|AES90626.1| Ycf20-like protein [Medicago
           truncatula]
          Length = 209

 Score =  184 bits (466), Expect = 2e-44
 Identities = 104/197 (52%), Positives = 121/197 (61%), Gaps = 11/197 (5%)
 Frame = +2

Query: 5   HTPKLDLTSYRKSS---------LSSRHGWRTVFALNTDGFTANNDQDNPNGDSSVLGET 157
           ++P+L + S R++          L  R GW   FALNTDG + N +Q + N   S LG T
Sbjct: 41  YSPQLAMASKRRAIPVANRDYTFLRRRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGGT 100

Query: 158 RLGRIVSAGGRQLLSKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDXXXXXXXX 337
           RLGRI+SAGGRQLL KLNSARKNFP KVFLLLLGFYTANALATILGQTGDWD        
Sbjct: 101 RLGRILSAGGRQLLDKLNSARKNFPTKVFLLLLGFYTANALATILGQTGDWDVLVAGVVV 160

Query: 338 XXIEGIGMLMYKRPMS--PGRMQSLVVMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 511
             IEGIGML+YK+P +   GR+QS +VM+N                              
Sbjct: 161 AAIEGIGMLIYKKPPTTRTGRLQSFLVMVN-----------------------------Y 191

Query: 512 WKAGVCLGLFVDAFKLG 562
           WKAG+CLGLFVDAFKLG
Sbjct: 192 WKAGICLGLFVDAFKLG 208


>gb|AFK43635.1| unknown [Medicago truncatula]
          Length = 201

 Score =  182 bits (463), Expect = 4e-44
 Identities = 100/174 (57%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
 Frame = +2

Query: 47  LSSRHGWRTVFALNTDGFTANNDQDNPNGDSSVLGETRLGRIVSAGGRQLLSKLNSARKN 226
           L  R GW   FALNTDG + N +Q + N   S LG TRLGRI+SAGGRQLL KLNSARKN
Sbjct: 56  LRRRPGWTVAFALNTDGLSGNGEQQSLNDSGSSLGGTRLGRILSAGGRQLLDKLNSARKN 115

Query: 227 FPMKVFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKRPMS--PGRMQ 400
           FP KVFLLLLGFYTANALATILGQTGDWD          IEGIGML+YK+P +   GR+Q
Sbjct: 116 FPTKVFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLIYKKPPTTRTGRLQ 175

Query: 401 SLVVMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGVCLGLFVDAFKLG 562
           S +VM+N                              WKAG+CLGLFVDAFKLG
Sbjct: 176 SFLVMVN-----------------------------YWKAGICLGLFVDAFKLG 200


>ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|222852020|gb|EEE89567.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  182 bits (462), Expect = 6e-44
 Identities = 103/172 (59%), Positives = 110/172 (63%), Gaps = 3/172 (1%)
 Frame = +2

Query: 56  RHGWRTVFALNTDGFTANNDQDNPNGDSSV-LGETRLGRIVSAGGRQLLSKLNSARKNFP 232
           R GWR  FAL+T G   N  Q+N NGDS   LG TRLGRIVSAGGRQLL KLNSARKNFP
Sbjct: 70  RQGWRIAFALDTGGLPGNGGQENVNGDSPPGLGGTRLGRIVSAGGRQLLEKLNSARKNFP 129

Query: 233 MKVFLLLLGFYTANALATILGQTGDWDXXXXXXXXXXIEGIGMLMYKRP--MSPGRMQSL 406
           MK+FLLLLGFYTANALATILGQTGDWD          IEGIGMLMYK+P  +S  R+Q  
Sbjct: 130 MKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSLSTRRLQYF 189

Query: 407 VVMINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKAGVCLGLFVDAFKLG 562
           V M+N                              WKAGVCLGLFVDAFKLG
Sbjct: 190 VAMMN-----------------------------YWKAGVCLGLFVDAFKLG 212


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