BLASTX nr result

ID: Scutellaria22_contig00020040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00020040
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]              99   4e-19
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...    80   1e-13
ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana] gi|...    80   2e-13
ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana] ...    80   2e-13
gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]        80   2e-13

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = -2

Query: 245  IDWKCIDAVLFAKTFSSNKHTDDCASRGCAYGVHTKNGLICNCALENALVCTPHNGYMYC 66
            I+W+C+++VLF      +KH D C+++G    V+TK G++C+C LEN+LVCTPHNGY+YC
Sbjct: 796  INWECVNSVLFPSQVLGDKHIDCCSTQGRKRSVNTKTGVVCSCMLENSLVCTPHNGYVYC 855

Query: 65   IKGTLDGIDGNSNFTLRDGES 3
            I G LD +D NS    R GES
Sbjct: 856  ITGFLDNLDCNSLLEQRTGES 876


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/82 (46%), Positives = 55/82 (67%)
 Frame = -2

Query: 248  SIDWKCIDAVLFAKTFSSNKHTDDCASRGCAYGVHTKNGLICNCALENALVCTPHNGYMY 69
            SIDW+ I +VLF+     N+   +C+S+G A+ VHTK G +C C L+N+LVCTPHNG +Y
Sbjct: 795  SIDWEPISSVLFSY---KNEDHFNCSSKGNAHVVHTKGGPVCTCVLQNSLVCTPHNGNVY 851

Query: 68   CIKGTLDGIDGNSNFTLRDGES 3
             I G  + ++G S   LR+G +
Sbjct: 852  FITGASEDLNGRSLLKLRNGSA 873


>ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
            gi|334185051|ref|NP_001189798.1| protein dicer-like 2
            [Arabidopsis thaliana]
            gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
            Full=Endoribonuclease Dicer homolog 2; AltName:
            Full=Dicer-like protein 2; Short=AtDCL2
            gi|332640403|gb|AEE73924.1| protein dicer-like 2
            [Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
            protein dicer-like 2 [Arabidopsis thaliana]
          Length = 1388

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 245  IDWKCIDAVLFAKTFSSNKHTDDCASRGCAYGVHTKNGLICNCALENALVCTPHNGYMYC 66
            IDW+ I +V         KH ++C++ G +  +HTK+GL C C ++NALV TPHNGY+YC
Sbjct: 794  IDWEVIRSVNLTSHEVLEKH-ENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYC 852

Query: 65   IKGTLDGIDGNSNFTLRD 12
             KG L+ ++GNS  T R+
Sbjct: 853  TKGVLNNLNGNSLLTKRN 870


>ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
            gi|332640404|gb|AEE73925.1| protein dicer-like 2
            [Arabidopsis thaliana]
          Length = 1374

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 245  IDWKCIDAVLFAKTFSSNKHTDDCASRGCAYGVHTKNGLICNCALENALVCTPHNGYMYC 66
            IDW+ I +V         KH ++C++ G +  +HTK+GL C C ++NALV TPHNGY+YC
Sbjct: 780  IDWEVIRSVNLTSHEVLEKH-ENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYC 838

Query: 65   IKGTLDGIDGNSNFTLRD 12
             KG L+ ++GNS  T R+
Sbjct: 839  TKGVLNNLNGNSLLTKRN 856


>gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
          Length = 1374

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/78 (46%), Positives = 52/78 (66%)
 Frame = -2

Query: 245  IDWKCIDAVLFAKTFSSNKHTDDCASRGCAYGVHTKNGLICNCALENALVCTPHNGYMYC 66
            IDW+ I +V         KH ++C++ G +  +HTK+GL C C ++NALV TPHNGY+YC
Sbjct: 780  IDWEVIRSVNLTSHEVLEKH-ENCSTNGASRILHTKDGLFCTCVVQNALVYTPHNGYVYC 838

Query: 65   IKGTLDGIDGNSNFTLRD 12
             KG L+ ++GNS  T R+
Sbjct: 839  TKGVLNNLNGNSLLTKRN 856


Top