BLASTX nr result

ID: Scutellaria22_contig00019761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00019761
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   125   5e-27
ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   120   1e-25
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   119   3e-25
ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis t...   119   3e-25
gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabi...   115   3e-24

>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 5/101 (4%)
 Frame = +2

Query: 14  TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 178
           + +L+SLP+F F SV      TN GDCAVCLS+FEP +QLRLLPLCCHAFHA CID W+V
Sbjct: 92  SSVLDSLPIFKFSSVTRRSSSTNSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLV 151

Query: 179 SNQTCPLCRSTVLPFGSDALDKILNRRNTNNSIGGSFRIEL 301
           SNQTCPLCRS +    SD +  ++   N +N    SFR+E+
Sbjct: 152 SNQTCPLCRSPLFASESDLMKSLVGGNNNSNGGENSFRLEI 192


>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
 Frame = +2

Query: 20  LLESLPLFPFRSVK----TNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIVSNQ 187
           L++SLPLF F SV+    ++ GDCAVCLS+FEP+DQLRLLP+CCHAFHA CID W+ SNQ
Sbjct: 100 LIDSLPLFTFGSVRGRNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQ 159

Query: 188 TCPLCRSTVLPFGSDALDKILNRRNTNNSIGGSFRIEL 301
           TCPLCRS +    +D +  IL   N     G SFRIEL
Sbjct: 160 TCPLCRSPIFATEADFMKAILASTNA----GDSFRIEL 193


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
 Frame = +2

Query: 14  TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 178
           + +L+SLP+F F SV       N GDCAVCLS+FEP DQLRLLPLCCHAFHA CID W+V
Sbjct: 30  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 89

Query: 179 SNQTCPLCRSTVLPFGSDALDKILNRRNTNNSIGGSFRIEL 301
           SNQTCPLCRS +    SD +  +    + N     SFR+E+
Sbjct: 90  SNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEI 130


>ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
           gi|68565314|sp|Q9LY41.1|ATL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL4; AltName: Full=Protein
           ARABIDOPSIS TOXICOS EN LEVADURA 4; Short=Protein ATL4;
           AltName: Full=RING-H2 finger protein ATL4; AltName:
           Full=RING-H2 finger protein RHX1a
           gi|7576198|emb|CAB87859.1| RING-H2 zinc finger protein
           ATL4 [Arabidopsis thaliana] gi|66865934|gb|AAY57601.1|
           RING finger family protein [Arabidopsis thaliana]
           gi|114050661|gb|ABI49480.1| At3g60220 [Arabidopsis
           thaliana] gi|332646504|gb|AEE80025.1| E3
           ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
          Length = 334

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/101 (56%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
 Frame = +2

Query: 14  TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 178
           + +L+SLP+F F SV       N GDCAVCLS+FEP DQLRLLPLCCHAFHA CID W+V
Sbjct: 91  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 150

Query: 179 SNQTCPLCRSTVLPFGSDALDKILNRRNTNNSIGGSFRIEL 301
           SNQTCPLCRS +    SD +  +    + N     SFR+E+
Sbjct: 151 SNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEI 191


>gb|AAD33582.1|AF132014_1 RING-H2 zinc finger protein ATL4 [Arabidopsis thaliana]
          Length = 326

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
 Frame = +2

Query: 14  TDLLESLPLFPFRSV-----KTNGGDCAVCLSRFEPNDQLRLLPLCCHAFHAACIDKWIV 178
           + +L+SLP+F F SV       N GDCAVCLS+FE  DQLRLLPLCCHAFHA CID W+V
Sbjct: 83  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFESEDQLRLLPLCCHAFHADCIDIWLV 142

Query: 179 SNQTCPLCRSTVLPFGSDALDKILNRRNTNNSIGGSFRIEL 301
           SNQTCPLCRS +    SD +  +    + N     SFR+E+
Sbjct: 143 SNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEI 183


Top