BLASTX nr result

ID: Scutellaria22_contig00018997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018997
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157488.1| PREDICTED: LOW QUALITY PROTEIN: activating s...    60   2e-07
ref|XP_004137429.1| PREDICTED: activating signal cointegrator 1 ...    60   2e-07
ref|XP_002514664.1| activating signal cointegrator 1 complex sub...    59   4e-07
ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...    55   5e-06
ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...    55   5e-06

>ref|XP_004157488.1| PREDICTED: LOW QUALITY PROTEIN: activating signal cointegrator 1
            complex subunit 3-like [Cucumis sativus]
          Length = 2067

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 343  LKRVSFTDFLQTNIDIPSNVNDFKGMKLIVVSDCYIGLDHEYAIENLV 200
            LKRVSF+D L T + +P   NDF+ MKLI+VSDCY+G + EY+I+ L+
Sbjct: 2019 LKRVSFSDRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSIKELL 2066


>ref|XP_004137429.1| PREDICTED: activating signal cointegrator 1 complex subunit 3-like
            [Cucumis sativus]
          Length = 2093

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = -3

Query: 343  LKRVSFTDFLQTNIDIPSNVNDFKGMKLIVVSDCYIGLDHEYAIENLV 200
            LKRVSF+D L T + +P   NDF+ MKLI+VSDCY+G + EY+I+ L+
Sbjct: 2045 LKRVSFSDRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSIKELL 2092


>ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
            [Ricinus communis] gi|223546268|gb|EEF47770.1| activating
            signal cointegrator 1 complex subunit 3, helc1, putative
            [Ricinus communis]
          Length = 2100

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/48 (54%), Positives = 39/48 (81%)
 Frame = -3

Query: 343  LKRVSFTDFLQTNIDIPSNVNDFKGMKLIVVSDCYIGLDHEYAIENLV 200
            LKRV+F+D L T++DIPS++  F+ +KL++VSDCY+G + E+ IE LV
Sbjct: 2044 LKRVTFSDRLVTHMDIPSSLTTFQEIKLMLVSDCYLGFEQEHCIEELV 2091


>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|332010042|gb|AED97425.1| U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = -3

Query: 343  LKRVSFTDFLQTNIDIPSNVNDFKGMKLIVVSDCYIGLDHEYAIENL 203
            +KRVSFT  L T +++P N+  F+  KLI+VSDCY+G + E++IE L
Sbjct: 2096 VKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIEQL 2142


>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
            thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = -3

Query: 343  LKRVSFTDFLQTNIDIPSNVNDFKGMKLIVVSDCYIGLDHEYAIENL 203
            +KRVSFT  L T +++P N+  F+  KLI+VSDCY+G + E++IE L
Sbjct: 2107 VKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIEQL 2153


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