BLASTX nr result

ID: Scutellaria22_contig00018198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00018198
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33509.3| unnamed protein product [Vitis vinifera]               60   1e-07
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...    55   6e-06

>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
          Length = 866

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
 Frame = -1

Query: 469 MRTRSQSKRPRSVGEPEATKGEGLDENETLSNISRGAVGKLLKRVK----KGFNKEDVAY 302
           MRTR+Q K+     +         DE+ TL+ ISR AVGKLL+R       G  K D + 
Sbjct: 1   MRTRNQCKQKNHSSDNSDAAKALNDESGTLAEISREAVGKLLRRANPRRSSGIRKLD-SC 59

Query: 301 LRQCETAPEMDRGSKDFEKKPIGATEGSNTSALETHSREAMELHASRPEMDGE------- 143
            +QCE+   +  GSK  E    G     N    E   R A+       E+D +       
Sbjct: 60  SQQCESTGLI--GSKRSEILDTGGRVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYL 117

Query: 142 NNGYD--DFEWEDGSTPTLSSMKNFQEDLVNGVSVEFDISNGVEKRKPV 2
           N+G D  + +WE+GS PTL S+ N Q   +  V++E        ++KP+
Sbjct: 118 NSGEDINESDWEEGSIPTLDSVDNHQNAGIKEVTIELSGLLDSSQQKPI 166


>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
           vinifera]
          Length = 1103

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
 Frame = -1

Query: 397 DENETLSNISRGAVGKLLKRVK----KGFNKEDVAYLRQCETAPEMDRGSKDFEKKPIGA 230
           DE+ TL+ ISR AVGKLL+R       G  K D +  +QCE+   +  GSK  E    G 
Sbjct: 185 DESGTLAEISREAVGKLLRRANPRRSSGIRKLD-SCSQQCESTGLI--GSKRSEILDTGG 241

Query: 229 TEGSNTSALETHSREAMELHASRPEMDGE-------NNGYD--DFEWEDGSTPTLSSMKN 77
               N    E   R A+       E+D +       N+G D  + +WE+GS PTL S+ N
Sbjct: 242 RVTWNALDSEGCGRSAIGRSTLEKEVDEKSSQDTYLNSGEDINESDWEEGSIPTLDSVDN 301

Query: 76  FQEDLVNGVSVEFDISNGVEKRKPV 2
            Q   +  V++E        ++KP+
Sbjct: 302 HQNAGIKEVTIELSGLLDSSQQKPI 326


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