BLASTX nr result

ID: Scutellaria22_contig00017938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00017938
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   233   2e-59
ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779...   229   3e-58
ref|XP_002519306.1| nucleic acid binding protein, putative [Rici...   225   7e-57
gb|AAM61614.1| unknown [Arabidopsis thaliana]                         224   1e-56
ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]...   224   2e-56

>ref|XP_003609855.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355510910|gb|AES92052.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 311

 Score =  233 bits (595), Expect = 2e-59
 Identities = 111/198 (56%), Positives = 134/198 (67%)
 Frame = -1

Query: 694 RRFHRMKPEWGFDNFIPLAAFKDTANGYLIDDTCVFGAEVYVCREKITGKGECLSMMKDA 515
           +RFHRMK EWGFD FIPL  F   + GYL+DD C FGAEV+VCRE  TGKGE L MMKDA
Sbjct: 113 KRFHRMKVEWGFDQFIPLKDFNIGSKGYLLDDICAFGAEVFVCRENYTGKGESLIMMKDA 172

Query: 514 IAYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNGKGSGVGSYISLYLTLAEPEH 335
           + YK  W + DFS L  EC DSKPFN  + KW+I+LYP GK + +G Y++LYLTLA P  
Sbjct: 173 LPYKHVWEIKDFSKLDSECCDSKPFNVGNYKWQIKLYPKGKATDLGRYLALYLTLANPTT 232

Query: 334 LPPASKIYAEFTVRILDQLNRNHYYGTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLVK 155
           +PP SKIYA+  +RILDQ    H +  ANYWF+AS+   G  RF+  S       G LVK
Sbjct: 233 IPPGSKIYAQTILRILDQKQSKHQFWKANYWFSASSHEHGTSRFILCSNFTSQYLGYLVK 292

Query: 154 NICLVEAEVKVHAVVNPL 101
           +IC V+ EV V  VV+ L
Sbjct: 293 DICFVDVEVTVLGVVDAL 310



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
 Frame = -1

Query: 493 RVVDFSSLTEECVD---SKPFNAADQKWKIQLYPNG-KGSGVGSYISLYLTLAEPEHLPP 326
           ++  FS LT   ++   S  F A   KWK+ LYP+G K   V  +ISLYL L E   L P
Sbjct: 23  KIQSFSLLTTNSIERYESGRFEAGGHKWKLVLYPSGNKSKNVKDHISLYLALEESSSLHP 82

Query: 325 ASKIYAEFTVRILDQLNRNHYY----GTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLV 158
             +IY  F + + DQ N N+            F    +  G+ +F+     N  + G L+
Sbjct: 83  GWEIYVNFKLFVYDQNNDNYLVLQDDVKKEKRFHRMKVEWGFDQFIPLKDFNIGSKGYLL 142

Query: 157 KNICLVEAEVKV 122
            +IC   AEV V
Sbjct: 143 DDICAFGAEVFV 154


>ref|XP_003528597.1| PREDICTED: uncharacterized protein LOC100779090 [Glycine max]
          Length = 310

 Score =  229 bits (585), Expect = 3e-58
 Identities = 110/198 (55%), Positives = 138/198 (69%)
 Frame = -1

Query: 694 RRFHRMKPEWGFDNFIPLAAFKDTANGYLIDDTCVFGAEVYVCREKITGKGECLSMMKDA 515
           RRFH+MK EWG D FIPL  F   + GYL+DDTC FGAEV+VC+E+ TGKGECL MMK+A
Sbjct: 112 RRFHKMKAEWGIDQFIPLRDFNLASKGYLVDDTCAFGAEVFVCKERSTGKGECLVMMKEA 171

Query: 514 IAYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNGKGSGVGSYISLYLTLAEPEH 335
           I YK  +   + S L  EC DSKPFNA + KWKI+LYP GKG+ +G+Y+SLYL LA+P  
Sbjct: 172 ILYKHLYEFDNLSKLDLECYDSKPFNAGNFKWKIKLYPKGKGAELGNYLSLYLALADPSA 231

Query: 334 LPPASKIYAEFTVRILDQLNRNHYYGTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLVK 155
           L P SKIYA+ T+RILDQ    H++G ANYWF+AS+   G   F+  +       G +VK
Sbjct: 232 LSPCSKIYAQITLRILDQKQAKHHFGKANYWFSASSHENGAAIFMPINNFTNQNFGYVVK 291

Query: 154 NICLVEAEVKVHAVVNPL 101
           + C VEAEV +  VV+ L
Sbjct: 292 DSCFVEAEVIILGVVDAL 309



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
 Frame = -1

Query: 493 RVVDFSSLTEECVD---SKPFNAADQKWKIQLYPNG-KGSGVGSYISLYLTLAEPEHLPP 326
           ++  FS L +  ++   S  F A   KWK+ LYP+G K   +  +ISLYL L +   L  
Sbjct: 22  KIQSFSLLAKNSIERYESGKFEAGGYKWKLVLYPSGNKSKNIREHISLYLALDDTSSLHH 81

Query: 325 ASKIYAEFTVRILDQLNRNHYYG--TANYWFTASNMTCGW--PRFVSHSYLNQSTAGLLV 158
             +IY  F   + DQ N N+  G  T         M   W   +F+     N ++ G LV
Sbjct: 82  GWEIYVNFRFFLHDQTNDNYLVGPDTVRNERRFHKMKAEWGIDQFIPLRDFNLASKGYLV 141

Query: 157 KNICLVEAEVKV 122
            + C   AEV V
Sbjct: 142 DDTCAFGAEVFV 153


>ref|XP_002519306.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223541621|gb|EEF43170.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 455

 Score =  225 bits (573), Expect = 7e-57
 Identities = 107/197 (54%), Positives = 135/197 (68%)
 Frame = -1

Query: 691 RFHRMKPEWGFDNFIPLAAFKDTANGYLIDDTCVFGAEVYVCREKITGKGECLSMMKDAI 512
           RFH  + EWGFD  IPLA  KDT NGYL++DTCVFGAEV+V +E  TGKGECLSM+K + 
Sbjct: 259 RFHGFRLEWGFDQLIPLATLKDTKNGYLVEDTCVFGAEVFVRKESCTGKGECLSMIKSSS 318

Query: 511 AYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNGKGSGVGSYISLYLTLAEPEHL 332
             K+ WR  +FS L  EC DSK F A DQ+WKIQLYP GKG G G+++SL+L LA+   +
Sbjct: 319 TSKNLWRFENFSKLDAECNDSKTFVAGDQRWKIQLYPKGKGLGSGTHLSLFLALADLTAI 378

Query: 331 PPASKIYAEFTVRILDQLNRNHYYGTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLVKN 152
            P  KI A+FT+RILDQ   +H +G AN+WF+AS+  CGW RF     L  S+   L K+
Sbjct: 379 TPGFKILADFTLRILDQSRGSHLFGKANFWFSASSSVCGWSRFYPLDQLYASSNAYLFKD 438

Query: 151 ICLVEAEVKVHAVVNPL 101
            CL EAE+ V  + + L
Sbjct: 439 TCLGEAEITVLGITDEL 455



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
 Frame = -1

Query: 547 KGECLSMMKDAIAYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNG-KGSGVGSY 371
           +G  +S M DA     T ++  FS L  E  +S  F A   KWK+ LYP G K   V  +
Sbjct: 156 QGNGVSTMSDASPTHYTVKIQLFSLLAVEKYESGSFEAGGYKWKLVLYPKGNKSKNVMEH 215

Query: 370 ISLYLTLAEPEHLPPASKIYAEFTVRILDQLNRNHYYGTANYW-FTASNMTCGWPRFVSH 194
           +SLY+ +A+  +L    +++  F + +LDQ+  N+         F    +  G+ + +  
Sbjct: 216 LSLYIAMADSSNLQLGWEVHVVFRLFLLDQIRDNYLILPGKECRFHGFRLEWGFDQLIPL 275

Query: 193 SYLNQSTAGLLVKNICLVEAEVKV 122
           + L  +  G LV++ C+  AEV V
Sbjct: 276 ATLKDTKNGYLVEDTCVFGAEVFV 299


>gb|AAM61614.1| unknown [Arabidopsis thaliana]
          Length = 309

 Score =  224 bits (571), Expect = 1e-56
 Identities = 98/198 (49%), Positives = 139/198 (70%)
 Frame = -1

Query: 694 RRFHRMKPEWGFDNFIPLAAFKDTANGYLIDDTCVFGAEVYVCREKITGKGECLSMMKDA 515
           RRFH +K EWGFD FIP   F D++NGYL++DTC+FGA+V+V +E+ +G+GECLSM+KDA
Sbjct: 112 RRFHSVKREWGFDKFIPTGTFSDSSNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDA 171

Query: 514 IAYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNGKGSGVGSYISLYLTLAEPEH 335
            + K  W++ +FS L +E  DS  F A D+KWKI+ YP G   G G+++S+YLTL +PE 
Sbjct: 172 TSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPET 231

Query: 334 LPPASKIYAEFTVRILDQLNRNHYYGTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLVK 155
           +   +KI+ EFT+RI DQL   H  G    WF+ S+   GW ++VS  Y  Q  +GLL+K
Sbjct: 232 ISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLK 291

Query: 154 NICLVEAEVKVHAVVNPL 101
           ++CLVEA+V VH + + +
Sbjct: 292 DVCLVEADVCVHGITSAI 309



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
 Frame = -1

Query: 541 ECLSMMKDAIAYKSTWRVVDFSSLTEECVD---SKPFNAADQKWKIQLYPNG-KGSGVGS 374
           E +  + DA       ++  FS LT+  ++   ++ F A   KWK+ LYPNG K      
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 373 YISLYLTLAEPEHLPPASKIYAEFTVRILDQLNRNHYYGTAN-YWFTASNMTCGWPRFVS 197
           ++S+YL LA+   L P  ++YA F + +LDQ   N+     N   F +     G+ +F+ 
Sbjct: 69  HVSVYLALADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIP 128

Query: 196 HSYLNQSTAGLLVKNICLVEAEVKV 122
               + S+ G L+++ C+  A+V V
Sbjct: 129 TGTFSDSSNGYLMEDTCMFGADVFV 153


>ref|NP_566576.1| TRAF-like family protein [Arabidopsis thaliana]
           gi|332642426|gb|AEE75947.1| TRAF-like family protein
           [Arabidopsis thaliana]
          Length = 309

 Score =  224 bits (570), Expect = 2e-56
 Identities = 98/198 (49%), Positives = 138/198 (69%)
 Frame = -1

Query: 694 RRFHRMKPEWGFDNFIPLAAFKDTANGYLIDDTCVFGAEVYVCREKITGKGECLSMMKDA 515
           RRFH +K EWGFD FIP   F D +NGYL++DTC+FGA+V+V +E+ +G+GECLSM+KDA
Sbjct: 112 RRFHSVKREWGFDKFIPTGTFSDASNGYLMEDTCMFGADVFVSKERRSGRGECLSMIKDA 171

Query: 514 IAYKSTWRVVDFSSLTEECVDSKPFNAADQKWKIQLYPNGKGSGVGSYISLYLTLAEPEH 335
            + K  W++ +FS L +E  DS  F A D+KWKI+ YP G   G G+++S+YLTL +PE 
Sbjct: 172 TSSKHVWKIENFSKLDKESYDSNAFFAGDRKWKIEFYPTGTKQGTGTHLSIYLTLVDPET 231

Query: 334 LPPASKIYAEFTVRILDQLNRNHYYGTANYWFTASNMTCGWPRFVSHSYLNQSTAGLLVK 155
           +   +KI+ EFT+RI DQL   H  G    WF+ S+   GW ++VS  Y  Q  +GLL+K
Sbjct: 232 ISDGTKIFVEFTIRIFDQLQGRHIAGKVTKWFSRSSSEHGWVKYVSMVYFTQPNSGLLLK 291

Query: 154 NICLVEAEVKVHAVVNPL 101
           ++CLVEA+V VH + + +
Sbjct: 292 DVCLVEADVCVHGITSAI 309



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
 Frame = -1

Query: 541 ECLSMMKDAIAYKSTWRVVDFSSLTEECVD---SKPFNAADQKWKIQLYPNG-KGSGVGS 374
           E +  + DA       ++  FS LT+  ++   ++ F A   KWK+ LYPNG K      
Sbjct: 9   EIIKSISDAPPTHYMVKIESFSLLTKHAIERYETESFEAGGYKWKLVLYPNGNKSKNTKD 68

Query: 373 YISLYLTLAEPEHLPPASKIYAEFTVRILDQLNRNHYYGTAN-YWFTASNMTCGWPRFVS 197
           ++S+YL+LA+   L P  ++YA F + +LDQ   N+     N   F +     G+ +F+ 
Sbjct: 69  HVSVYLSLADSSSLSPGWEVYAVFRLYLLDQNKDNYLILQGNERRFHSVKREWGFDKFIP 128

Query: 196 HSYLNQSTAGLLVKNICLVEAEVKV 122
               + ++ G L+++ C+  A+V V
Sbjct: 129 TGTFSDASNGYLMEDTCMFGADVFV 153


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