BLASTX nr result
ID: Scutellaria22_contig00017328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00017328
(1357 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus] 208 4e-58
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland] 207 5e-58
ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g... 201 2e-56
ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote... 197 2e-55
ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]... 196 3e-54
>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
Length = 673
Score = 208 bits (529), Expect(2) = 4e-58
Identities = 111/290 (38%), Positives = 168/290 (57%), Gaps = 3/290 (1%)
Frame = +2
Query: 383 PQIYQRKMDNLFKDYFSFMFVYIDDILIASKNVKEHLKHLDIFSDVCHKEGLVFSEKKTE 562
P I+QR M N + F VY+DDI++ S +EH H+ G++ S+KKT
Sbjct: 375 PSIFQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSKKKTN 434
Query: 563 IATRQIEFLGIEIDESGIILQNHIVEKIQGFPDILKDKKQLQSFLGVVNFAGMFINNLAH 742
+ +I FLG+EID QNHI+E + FPD L+DKKQLQ FLGV+ +A +I LA
Sbjct: 435 LFKEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAE 494
Query: 743 YSKVFSPLLKKNAIFKWEDEHQEGIKQLKEVCQQLPRLVIPQDEDELVLYTDASDHWWAA 922
K LKK+ ++ W + +K++K+ P+L +P+ ED L++ TDASDH+W
Sbjct: 495 KRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGG 554
Query: 923 VLIKATPTG-EMSCNYCSGLFTESEVDR*HINDKEFFAVRKAFKKWSLFLTK-KFILKID 1096
VL T G E+ C Y SG F +E++ H N+KE AV++ K+S++LT F ++ D
Sbjct: 555 VLKAQTTEGNELICRYSSGTFKPAELNY-HSNEKELLAVKQVITKFSIYLTPVTFTVRTD 613
Query: 1097 N-SSVKAFLKNKIESKPENARRLRWQAECQYYDYDIVIVKSHENVLADFL 1243
N + +K F+ KI + R +RWQ +Y +++ +K +NVLAD+L
Sbjct: 614 NVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYL 663
Score = 44.7 bits (104), Expect(2) = 4e-58
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 183 RIRNEELDSSRQHPNSKKLSTI---KILYKCINLR--IYQIKMEE*SKKFTAFSTPQRHY 347
++ + S PN ++L T+ K ++ + + +Q+ +++ S+K TAF+ PQ H+
Sbjct: 303 KLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQGHF 362
Query: 348 IWNVMPIGLANAP 386
W V+P GL AP
Sbjct: 363 QWRVVPFGLKQAP 375
>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
Length = 673
Score = 207 bits (528), Expect(2) = 5e-58
Identities = 111/290 (38%), Positives = 167/290 (57%), Gaps = 3/290 (1%)
Frame = +2
Query: 383 PQIYQRKMDNLFKDYFSFMFVYIDDILIASKNVKEHLKHLDIFSDVCHKEGLVFSEKKTE 562
P I+QR M N + F VY+DDI++ S +EH H+ G++ SEKK
Sbjct: 375 PSIFQRHMQNALRGLEEFCLVYVDDIIVFSDKEEEHYTHVLKVLKRIESLGIILSEKKAN 434
Query: 563 IATRQIEFLGIEIDESGIILQNHIVEKIQGFPDILKDKKQLQSFLGVVNFAGMFINNLAH 742
+ +I FLG+EID QNHI+E + FPD L+DKKQLQ FLGV+ +A +I LA
Sbjct: 435 LFKEKINFLGLEIDRGTHTPQNHILEHLHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAE 494
Query: 743 YSKVFSPLLKKNAIFKWEDEHQEGIKQLKEVCQQLPRLVIPQDEDELVLYTDASDHWWAA 922
K LKK+ ++ W + +K++K+ P+L +P+ ED L++ TDASDH+W
Sbjct: 495 KRKPLQVKLKKDQVWIWNQSDTDYVKKIKKGLVNFPKLYLPKKEDSLIIETDASDHFWGG 554
Query: 923 VLIKATPTG-EMSCNYCSGLFTESEVDR*HINDKEFFAVRKAFKKWSLFLTK-KFILKID 1096
VL T G E+ C Y SG F +E++ H N+KE AV++ K+S++LT F ++ D
Sbjct: 555 VLKAQTTEGNELICRYSSGTFKPAELNY-HSNEKELLAVKQVITKFSIYLTPVTFTVRTD 613
Query: 1097 N-SSVKAFLKNKIESKPENARRLRWQAECQYYDYDIVIVKSHENVLADFL 1243
N + +K F+ KI + R +RWQ +Y +++ +K +NVLAD+L
Sbjct: 614 NVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYL 663
Score = 44.7 bits (104), Expect(2) = 5e-58
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 183 RIRNEELDSSRQHPNSKKLSTI---KILYKCINLR--IYQIKMEE*SKKFTAFSTPQRHY 347
++ + S PN ++L T+ K ++ + + +Q+ +++ S+K TAF+ PQ H+
Sbjct: 303 KLNEVTIGDSHNLPNMQELITLLRGKTIFSSFDCKSGFWQVFLDQESQKLTAFTCPQGHF 362
Query: 348 IWNVMPIGLANAP 386
W V+P GL AP
Sbjct: 363 QWRVVPFGLKQAP 375
>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
Length = 674
Score = 201 bits (511), Expect(2) = 2e-56
Identities = 108/290 (37%), Positives = 166/290 (57%), Gaps = 3/290 (1%)
Frame = +2
Query: 383 PQIYQRKMDNLFKDYFSFMFVYIDDILIASKNVKEHLKHLDIFSDVCHKEGLVFSEKKTE 562
P I+QR M + + F VY+DDI++ S N +H H+ G++ S+KK
Sbjct: 373 PSIFQRHMQDALRGLEEFSLVYVDDIIVFSDNKNDHQDHVMKVLRRIESLGIILSKKKAN 432
Query: 563 IATRQIEFLGIEIDESGIILQNHIVEKIQGFPDILKDKKQLQSFLGVVNFAGMFINNLAH 742
+ +I FLG+EID QNHI++ I FPD ++DKKQLQ FLGV+ +A +I LA
Sbjct: 433 LFKEKINFLGLEIDRGTHTPQNHILDHIHTFPDRIEDKKQLQRFLGVLTYADSYIPKLAE 492
Query: 743 YSKVFSPLLKKNAIFKWEDEHQEGIKQLKEVCQQLPRLVIPQDEDELVLYTDASDHWWAA 922
K LKK+ ++ W + +K++K+ P+L +P+ ED L++ TDASDH+W
Sbjct: 493 KRKPLQVKLKKDQVWIWTQSDTDYVKKIKKGLINFPKLYLPKKEDSLIIETDASDHFWGG 552
Query: 923 VLIKATPTG-EMSCNYCSGLFTESEVDR*HINDKEFFAVRKAFKKWSLFLTKK-FILKID 1096
VL T G E+ C Y SG F +E++ H N+KE AV++ K+S++LT F ++ D
Sbjct: 553 VLKAQTTEGEELICRYSSGTFKPAELNY-HSNEKELLAVKQVITKFSIYLTPVCFTVRTD 611
Query: 1097 N-SSVKAFLKNKIESKPENARRLRWQAECQYYDYDIVIVKSHENVLADFL 1243
N + +K F+ KI + R +RWQ +Y + + +K +NVLAD+L
Sbjct: 612 NVNLLKGFMNKKITGDSKQGRLIRWQMWFSHYTFKVDHLKGEQNVLADYL 661
Score = 45.8 bits (107), Expect(2) = 2e-56
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 183 RIRNEELDSSRQHPNSKKLSTI---KILYKCINLR--IYQIKMEE*SKKFTAFSTPQRHY 347
++ + S PN ++L T+ K ++ + + +Q+ +++ S+K TAF+ PQ HY
Sbjct: 301 KLNEVTIGDSHNLPNMQELITLLRGKNIFSSFDCKSGFWQVLLDDESQKLTAFTCPQGHY 360
Query: 348 IWNVMPIGLANAP 386
W V+P GL AP
Sbjct: 361 QWRVVPFGLKQAP 373
>ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
Reverse transcriptase] [Figwort mosaic virus]
gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic
polyprotein; Includes: RecName: Full=Aspartic protease;
Includes: RecName: Full=Endonuclease; Includes: RecName:
Full=Reverse transcriptase gi|58813|emb|CAA29527.1|
unnamed protein product [Figwort mosaic virus]
Length = 666
Score = 197 bits (501), Expect(2) = 2e-55
Identities = 106/289 (36%), Positives = 162/289 (56%), Gaps = 2/289 (0%)
Frame = +2
Query: 383 PQIYQRKMDNLFKDYFSFMFVYIDDILIASKNVKEHLKHLDIFSDVCHKEGLVFSEKKTE 562
P I+QR M F VY+DDI++ S + +H H+ + K G++ S+KK
Sbjct: 373 PSIFQRHMQTALNGADKFCMVYVDDIIVFSNSELDHYNHVYAVLKIVEKYGIILSKKKAN 432
Query: 563 IATRQIEFLGIEIDESGIILQNHIVEKIQGFPDILKDKKQLQSFLGVVNFAGMFINNLAH 742
+ +I FLG+EID+ QNHI+E I FPD L+DKK LQ FLGV+ +A +I LA
Sbjct: 433 LFKEKINFLGLEIDKGTHCPQNHILENIHKFPDRLEDKKHLQRFLGVLTYAETYIPKLAE 492
Query: 743 YSKVFSPLLKKNAIFKWEDEHQEGIKQLKEVCQQLPRLVIPQDEDELVLYTDASDHWWAA 922
K LKK+ + W + +K++K+ P+L +P+ ED L++ TDASD +W
Sbjct: 493 IRKPLQVKLKKDVTWNWTQSDSDYVKKIKKNLGSFPKLYLPKPEDHLIIETDASDSFWGG 552
Query: 923 VL-IKATPTGEMSCNYCSGLFTESEVDR*HINDKEFFAVRKAFKKWSLFLTK-KFILKID 1096
VL +A E+ C Y SG F ++E + H NDKE AV++ K+S +LT +F ++ D
Sbjct: 553 VLKARALDGVELICRYSSGSFKQAEKNY-HSNDKELLAVKQVITKFSAYLTPVRFTVRTD 611
Query: 1097 NSSVKAFLKNKIESKPENARRLRWQAECQYYDYDIVIVKSHENVLADFL 1243
N + FL+ ++ + R +RWQ Y +D+ ++ +NVLAD L
Sbjct: 612 NKNFTYFLRINLKGDSKQGRLVRWQNWFSKYQFDVEHLEGVKNVLADCL 660
Score = 46.2 bits (108), Expect(2) = 2e-55
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +3
Query: 186 IRNEELDSSRQHPNSKKLSTI---KILYKCINLR--IYQIKMEE*SKKFTAFSTPQRHYI 350
I + S PN ++L T+ K ++ + + +Q+ ++E S+K TAF+ PQ H+
Sbjct: 302 INQATIGDSHNLPNMQELLTLLRGKSIFSSFDCKSGFWQVVLDEESQKLTAFTCPQGHFQ 361
Query: 351 WNVMPIGLANAP 386
W V+P GL AP
Sbjct: 362 WKVVPFGLKQAP 373
>ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]
gi|401620160|gb|AFP95350.1| reverse transcriptase
[Soybean Putnam virus]
Length = 699
Score = 196 bits (497), Expect(2) = 3e-54
Identities = 105/290 (36%), Positives = 165/290 (56%), Gaps = 3/290 (1%)
Frame = +2
Query: 383 PQIYQRKMDNLFKDYFSFMFVYIDDILIASKNVKEHLKHLDIFSDVCHKEGLVFSEKKTE 562
P I+QR M N F+ + F VY+DDIL+ S N ++H +H+ C++ G++ S+KK +
Sbjct: 405 PSIFQRHMQNAFRSFEKFCCVYVDDILVFSDNEQDHHRHVMALLQRCNQLGIILSKKKAQ 464
Query: 563 IATRQIEFLGIEIDESGIILQNHIVEKIQGFPDILKDKKQLQSFLGVVNFAGMFINNLAH 742
+ +I FLG+EID+ QNHI+E I FPD ++DKKQLQ FLG++ +A +I LA
Sbjct: 465 LFQEKINFLGLEIDQGSHKPQNHILEHIHKFPDKIEDKKQLQRFLGILTYASDYIPKLAE 524
Query: 743 YSKVFSPLLKKNAIFKWEDEHQEGIKQLKEVCQQLPRLVIPQDEDELVLYTDASDHWWAA 922
K LKK+ + W + + ++K+ + P L P+ D L++ TDAS +W
Sbjct: 525 IRKPLQSKLKKDVPWTWTHDDINYMSKIKKNLKSFPTLYHPKLTDTLIIETDASGSFWGG 584
Query: 923 VLIKATPT--GEMSCNYCSGLFTESEVDR*HINDKEFFAVRKAFKKWSLFLTK-KFILKI 1093
+L T E+ C Y SG F +E++ H N+KE AV KK++ +LT KF+++
Sbjct: 585 ILKARTENSDSELICRYTSGSFKAAELNY-HSNEKEILAVMNTIKKFTGYLTPVKFLIRT 643
Query: 1094 DNSSVKAFLKNKIESKPENARRLRWQAECQYYDYDIVIVKSHENVLADFL 1243
DN + FLK ++ + R +RWQ Y +++ + +NV ADFL
Sbjct: 644 DNKNFTHFLKINLKGDYKQGRLVRWQMWFSRYVFEVEHLSGDKNVFADFL 693
Score = 43.9 bits (102), Expect(2) = 3e-54
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +3
Query: 183 RIRNEELDSSRQHPNSKKLSTI---KILYKCINLR--IYQIKMEE*SKKFTAFSTPQRHY 347
+I + S PN +L T+ K +Y + + +Q+ +++ S+ TAF+ P HY
Sbjct: 333 KINEATIGDSHNLPNKDELLTLIRGKTIYSSFDCKSGFWQVFLDQESQLLTAFTCPSGHY 392
Query: 348 IWNVMPIGLANAP 386
W V+P GL AP
Sbjct: 393 QWRVVPFGLKQAP 405