BLASTX nr result

ID: Scutellaria22_contig00017181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00017181
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163065.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small ...   103   2e-20
ref|XP_004143591.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   103   2e-20
emb|CBI25311.3| unnamed protein product [Vitis vinifera]              102   2e-20
ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    99   3e-19
ref|XP_002532395.1| conserved hypothetical protein [Ricinus comm...    99   5e-19

>ref|XP_004163065.1| PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear
           ribonucleoprotein Prp3-like [Cucumis sativus]
          Length = 923

 Score =  103 bits (256), Expect = 2e-20
 Identities = 65/142 (45%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
 Frame = +2

Query: 2   DGTASDAGKSGGLSLDALAKAKRALQMQKELAERMKKIPSLNRDAGSTQ--------KDA 157
           DGT+S AGKSG LSLDALAKAK+ALQMQKELAE++K+IP + +  GS+         ++ 
Sbjct: 326 DGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIPLMKKVGGSSSANSSVVKSEEK 385

Query: 158 AKVSSSVKGILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGLPHLPGLTAQKYE 337
           AK  S + G L T                                 GL  +P +     E
Sbjct: 386 AKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVPAGLTSIPHI-----E 440

Query: 338 AVKRAQELAAKMGFRQDPEFAP 403
           AVKRAQELAA+MGFRQDPEFAP
Sbjct: 441 AVKRAQELAARMGFRQDPEFAP 462


>ref|XP_004143591.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Cucumis
           sativus]
          Length = 923

 Score =  103 bits (256), Expect = 2e-20
 Identities = 65/142 (45%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
 Frame = +2

Query: 2   DGTASDAGKSGGLSLDALAKAKRALQMQKELAERMKKIPSLNRDAGSTQ--------KDA 157
           DGT+S AGKSG LSLDALAKAK+ALQMQKELAE++K+IP + +  GS+         ++ 
Sbjct: 326 DGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEK 385

Query: 158 AKVSSSVKGILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGLPHLPGLTAQKYE 337
           AK  S + G L T                                 GL  +P +     E
Sbjct: 386 AKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAANALDGGINVPAGLTSIPHI-----E 440

Query: 338 AVKRAQELAAKMGFRQDPEFAP 403
           AVKRAQELAA+MGFRQDPEFAP
Sbjct: 441 AVKRAQELAARMGFRQDPEFAP 462


>emb|CBI25311.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  102 bits (255), Expect = 2e-20
 Identities = 71/145 (48%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
 Frame = +2

Query: 2   DGTASDAGKSGGLSLDALAKAKRALQMQKELAERMKKIPSLNRDA-----GSTQ---KDA 157
           DGT S AGKSG LSLDALAKAK+ALQMQKEL+E++KKIP LN+ A     GS Q   K+ 
Sbjct: 276 DGTTSAAGKSGNLSLDALAKAKKALQMQKELSEKLKKIPLLNKGASPSSDGSPQLKPKEE 335

Query: 158 AKVSSSVKGIL--PTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGLPHLPGLTAQ- 328
             + SS  G L                                     G+  L GLT+  
Sbjct: 336 VTLPSSTTGKLLGSVPLTTATEAVSLVAMPSTSTLPAAAAASVMPSASGVGALAGLTSMP 395

Query: 329 KYEAVKRAQELAAKMGFRQDPEFAP 403
            +EAVKRAQELAAKMGFRQDPEFAP
Sbjct: 396 NFEAVKRAQELAAKMGFRQDPEFAP 420


>ref|XP_003516736.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine
           max]
          Length = 832

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/141 (39%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   DGTASDAGKSGGLSLDALAKAKRALQMQKELAERMKKIPSLNRDAGSTQKDAAKVSSSVK 181
           DG++S AGK+G LS+DALAKAK+ALQMQKEL+E++KKIP LN+ +    + ++ + S  +
Sbjct: 227 DGSSSAAGKTGSLSIDALAKAKKALQMQKELSEKLKKIPQLNKSSSQNSQGSSNLGSMNE 286

Query: 182 GILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGLP-------HLPGLTAQKYEA 340
             +P+                                   P        +P  T    EA
Sbjct: 287 SAVPSSAAGVALKSSTSASLGHVANMSMFPSTAFAASANTPVIGTSAVGIPNATLPNLEA 346

Query: 341 VKRAQELAAKMGFRQDPEFAP 403
           V+RAQELAA+MGFRQDP+FAP
Sbjct: 347 VRRAQELAARMGFRQDPQFAP 367


>ref|XP_002532395.1| conserved hypothetical protein [Ricinus communis]
           gi|223527891|gb|EEF29980.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 683

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 65/139 (46%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
 Frame = +2

Query: 2   DGTASDAGKSGGLSLDALAKAKRALQMQKELAERMKKIPSLNRDAGSTQKDAA----KVS 169
           DGT+S AGKSG L LDALAKAK+ALQMQKELAE++KKIP L++ A S+  + A    K+ 
Sbjct: 252 DGTSSAAGKSGTLPLDALAKAKKALQMQKELAEKLKKIPQLSKGANSSSDNKAPAVMKLQ 311

Query: 170 SSVKGILPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGLPHLPGLTA-QKYEAVK 346
           SS  G+                                    G+  +PGL +    EAVK
Sbjct: 312 SSGIGVTQGSAPSKPFASVAVGALPSSSPAN-----------GVASVPGLASLPNIEAVK 360

Query: 347 RAQELAAKMGFRQDPEFAP 403
           RAQELAAK+GFRQDPEF P
Sbjct: 361 RAQELAAKIGFRQDPEFPP 379


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