BLASTX nr result

ID: Scutellaria22_contig00017127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00017127
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   106   2e-21
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   104   7e-21
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   103   1e-20

>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  116 bits (290), Expect = 2e-24
 Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
 Frame = -2

Query: 520 ANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDATKGGDNDL 353
           AN NDMEL+KYK+L +P AILVKK YEEKR     KPRS KLKS NME+DD    GD + 
Sbjct: 382 ANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEK 441

Query: 352 DNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SLSLVHEFDDLDIDG 176
            NS+YE FL+DLEE P+L  N+SL  + E +P E  SM D E + S+ L     DL+ID 
Sbjct: 442 MNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIPLEELLADLEIDD 501

Query: 175 *ED 167
            ED
Sbjct: 502 AED 504


>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  114 bits (285), Expect = 8e-24
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
 Frame = -2

Query: 520 ANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDATKGGDNDL 353
           AN NDMEL+KYK+L +P AILVKK YEEKR     KPRS KLKS NME+DD    GD + 
Sbjct: 382 ANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEVDDTRARGDQEK 441

Query: 352 DNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SLSLVHEFDDLDIDG 176
            NS+YE FL+DLEE P+L  N+SL  + E +P E  SM D E + S+ L     DL+I+ 
Sbjct: 442 MNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGEDIPSIPLEELLADLEIND 501

Query: 175 *ED 167
            ED
Sbjct: 502 AED 504


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  106 bits (265), Expect = 2e-21
 Identities = 64/123 (52%), Positives = 78/123 (63%), Gaps = 5/123 (4%)
 Frame = -2

Query: 520 ANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDATKGGDNDL 353
           AN NDMEL KY+   LP AIL+KK YEEKR     KPRS KLKS NME+DD+    D + 
Sbjct: 381 ANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEK 440

Query: 352 DNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SLSLVHEFDDLDIDG 176
            N++YE FL+DLEE P+L  N+SL  + E +P E  SM D E L S+ L     DLD+  
Sbjct: 441 MNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVPLEELLADLDLSE 500

Query: 175 *ED 167
            ED
Sbjct: 501 EED 503


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  104 bits (260), Expect = 7e-21
 Identities = 62/118 (52%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
 Frame = -2

Query: 520 ANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDATKGGDNDL 353
           AN NDMEL KY+   LP AIL+KK YEEKR     KPRS KLKS NME+DD+    D + 
Sbjct: 381 ANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEK 440

Query: 352 DNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECL-SLSLVHEFDDLDI 182
            N++YE FL+DLEE P+L  N+SL  + E +P E  SM D E L S+ L     DLD+
Sbjct: 441 MNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDLPSVPLEELLADLDL 498


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
 Frame = -2

Query: 520 ANINDMELNKYKDLDLPHAILVKKIYEEKRV----KPRSLKLKSPNMEIDDATKGGDNDL 353
           AN NDMEL KYK L+LP AIL+KK YEEKR     KPRS KLKS +M++DD TK  +N +
Sbjct: 381 ANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLSMDVDDKTKVDENKM 440

Query: 352 DNSDYEHFLKDLEEMPDLMSNLSLCPDGEIRPCESDSMADDECLSLSLVHEFDDLDI 182
            NS+YE FL+DLEE PDL  N+SL  + E +P E     D    S+ L     DLD+
Sbjct: 441 -NSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGP--SVPLEELLADLDL 494


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