BLASTX nr result

ID: Scutellaria22_contig00017116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00017116
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16259.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...   110   9e-23
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p...   102   3e-20
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
gb|ABK93461.1| unknown [Populus trichocarpa]                          101   7e-20

>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
 Frame = +3

Query: 6   NGACFGSPIITAKRDMQWFQLSFEEAFYLCSVMKCIEVVFENKRVKYDKELWHYMTSQTV 185
           N +CFG P+ITA++D QWFQLS EEAFYLC  + C+++V E+  +K D+ELW YM S+  
Sbjct: 57  NRSCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRE 116

Query: 186 LF----KAYSHLRNKNWVVRAGSQYG 251
            F     AYSHLR KNWVVR+GSQYG
Sbjct: 117 TFPDFYMAYSHLRIKNWVVRSGSQYG 142


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 4/86 (4%)
 Frame = +3

Query: 6   NGACFGSPIITAKRDMQWFQLSFEEAFYLCSVMKCIEVVFENKRVKYDKELWHYMTSQTV 185
           N +CFG P+ITA++D QWFQLS EEAFYLC  + C+++V E+  +K D+ELW YM S+  
Sbjct: 57  NRSCFGRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRE 116

Query: 186 LF----KAYSHLRNKNWVVRAGSQYG 251
            F     AYSHLR KNWVVR+GSQYG
Sbjct: 117 TFPDFYMAYSHLRIKNWVVRSGSQYG 142


>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
           communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
           endonuclease subunit Sen2-2, putative [Ricinus communis]
          Length = 237

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/84 (59%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = +3

Query: 12  ACFGSPIITAKRDMQWFQLSFEEAFYLCSVMKCIEVVFENKRVKYDKELWHYMTSQTVLF 191
           ACFG P+IT+++D QWFQL  EEAFYL   +KCI++V E+     D ELW +M SQ   F
Sbjct: 59  ACFGRPMITSEKDKQWFQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQFMKSQKPTF 118

Query: 192 ----KAYSHLRNKNWVVRAGSQYG 251
               KAYSHLR KNWVVR GSQYG
Sbjct: 119 PDFYKAYSHLRMKNWVVRPGSQYG 142


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = +3

Query: 12  ACFGSPIITAKRDMQWFQLSFEEAFYLCSVMKCIEVVFENKRVKYDKELWHYMTSQTVLF 191
           ACFG PIITA+++ QWFQL  EEAFYLC  +KC+++  E+  VK D +LW YM  +   F
Sbjct: 59  ACFGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKF 118

Query: 192 ----KAYSHLRNKNWVVRAGSQYG 251
               KAYSHLR KNWV+R G QYG
Sbjct: 119 PDFYKAYSHLRMKNWVLRPGLQYG 142


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 4/84 (4%)
 Frame = +3

Query: 12  ACFGSPIITAKRDMQWFQLSFEEAFYLCSVMKCIEVVFENKRVKYDKELWHYMTSQTVLF 191
           ACFG PIITA+++ QWFQL  EEAFYLC  +KC+++  E+  VK D +LW YM  +   F
Sbjct: 59  ACFGKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKF 118

Query: 192 ----KAYSHLRNKNWVVRAGSQYG 251
               KAYSHLR KNWV+R G QYG
Sbjct: 119 PDFYKAYSHLRMKNWVLRPGLQYG 142


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