BLASTX nr result

ID: Scutellaria22_contig00016876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00016876
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana...   142   1e-31
gb|AAO64742.1| At1g03530 [Arabidopsis thaliana] gi|110735969|dbj...   142   1e-31
ref|XP_002892167.1| hypothetical protein ARALYDRAFT_311450 [Arab...   138   2e-30
ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_002517974.1| conserved hypothetical protein [Ricinus comm...   134   3e-29

>ref|NP_171852.2| nuclear assembly factor 1 [Arabidopsis thaliana]
            gi|9280664|gb|AAF86533.1|AC002560_26 F21B7.15
            [Arabidopsis thaliana] gi|332189462|gb|AEE27583.1|
            nuclear assembly factor 1 [Arabidopsis thaliana]
          Length = 801

 Score =  142 bits (359), Expect = 1e-31
 Identities = 70/118 (59%), Positives = 83/118 (70%)
 Frame = +2

Query: 830  EKNEEDDTVDEKSDMEDGEIVLSDADEMVAWXXXXXXXXXXXXTRPITSKNELKALPPVP 1009
            E+N +DD  DE  D +D +    D +EMVAW              PI SKNELK LPPVP
Sbjct: 310  EENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVP 369

Query: 1010 SISVTLEPHHQTLPVGTVLSIVGAQVIVEGVEKHNPLNEGSILWITDSRSPLGIVDEI 1183
             + VTLEPHH TLPVG VLS++ AQVIVEG+EKH+PL EGSILWIT+ R+PLG+VDEI
Sbjct: 370  PVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDEI 427


>gb|AAO64742.1| At1g03530 [Arabidopsis thaliana] gi|110735969|dbj|BAE99959.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|225897866|dbj|BAH30265.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 801

 Score =  142 bits (359), Expect = 1e-31
 Identities = 70/118 (59%), Positives = 83/118 (70%)
 Frame = +2

Query: 830  EKNEEDDTVDEKSDMEDGEIVLSDADEMVAWXXXXXXXXXXXXTRPITSKNELKALPPVP 1009
            E+N +DD  DE  D +D +    D +EMVAW              PI SKNELK LPPVP
Sbjct: 310  EENGDDDIEDEDDDDDDDDDDDDDVNEMVAWSNDEDDDLGLQTKEPIRSKNELKELPPVP 369

Query: 1010 SISVTLEPHHQTLPVGTVLSIVGAQVIVEGVEKHNPLNEGSILWITDSRSPLGIVDEI 1183
             + VTLEPHH TLPVG VLS++ AQVIVEG+EKH+PL EGSILWIT+ R+PLG+VDEI
Sbjct: 370  PVDVTLEPHHATLPVGVVLSVMSAQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDEI 427


>ref|XP_002892167.1| hypothetical protein ARALYDRAFT_311450 [Arabidopsis lyrata subsp.
            lyrata] gi|297338009|gb|EFH68426.1| hypothetical protein
            ARALYDRAFT_311450 [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  138 bits (348), Expect = 2e-30
 Identities = 69/121 (57%), Positives = 83/121 (68%)
 Frame = +2

Query: 821  GKKEKNEEDDTVDEKSDMEDGEIVLSDADEMVAWXXXXXXXXXXXXTRPITSKNELKALP 1000
            G+ E  +E+D  DE  D ED +    D + MVAW              PI SKNELK LP
Sbjct: 298  GEIENLDEEDGDDEIEDDEDDDADDDDDEAMVAWSNDEDDDLGLQTKEPIRSKNELKELP 357

Query: 1001 PVPSISVTLEPHHQTLPVGTVLSIVGAQVIVEGVEKHNPLNEGSILWITDSRSPLGIVDE 1180
            PVP++ VTLEPHH TLPVG VLS++  QVIVEG+EKH+PL EGSILWIT+ R+PLG+VDE
Sbjct: 358  PVPAVDVTLEPHHATLPVGVVLSVMSTQVIVEGMEKHSPLTEGSILWITEKRTPLGLVDE 417

Query: 1181 I 1183
            I
Sbjct: 418  I 418


>ref|XP_002329402.1| predicted protein [Populus trichocarpa] gi|222870452|gb|EEF07583.1|
            predicted protein [Populus trichocarpa]
          Length = 685

 Score =  135 bits (341), Expect = 2e-29
 Identities = 95/274 (34%), Positives = 131/274 (47%), Gaps = 22/274 (8%)
 Frame = +2

Query: 428  EKERNVVVEASVEIGSEGVCEKVD-EKGVLGGLGCLIEEQLGKVSLEGTSNCSIPASEND 604
            E+++ +V  + +E   +   E+V+ E+G  G L C IEE++G+VSL   S  S+  ++  
Sbjct: 88   EEKKGIVDGSDLEGLMKVKGERVELERG--GSLECSIEEEMGRVSLVAVS--SLVVADGG 143

Query: 605  QNVSGGMRVVSGGACVTDAGEEVGVVG--NAKRVXXXXXXXXXXXXXXXXXXXXXXXXXX 778
              V G    +  G  +  +G ++G     N K V                          
Sbjct: 144  GKVVGEEAEIDNGGLINVSGSDIGNGSGVNGKVVNDEDERESESSESESESESSESSSSS 203

Query: 779  XXXXXXXXXXXIRGGKKEKNEEDDTVDEKSDMEDGEI-------------------VLSD 901
                        +  ++ +   +  +D+  DME+GEI                      D
Sbjct: 204  DDDGEEDSEEEKQEEREVREVVNKELDDLGDMEEGEIRDVNGEEMVGRDDTDVEVFEEED 263

Query: 902  ADEMVAWXXXXXXXXXXXXTRPITSKNELKALPPVPSISVTLEPHHQTLPVGTVLSIVGA 1081
             D+MV W              PI SKNELK LPPVP +  +LEPHHQ   VG VLS +G+
Sbjct: 264  GDKMVEWSDFDEDEDAVNEGDPIRSKNELKFLPPVPPVVASLEPHHQMQAVGAVLSAIGS 323

Query: 1082 QVIVEGVEKHNPLNEGSILWITDSRSPLGIVDEI 1183
            QVIVEGVEKHNPLNEGSILWIT+ RSPLG+VDEI
Sbjct: 324  QVIVEGVEKHNPLNEGSILWITEKRSPLGLVDEI 357


>ref|XP_002517974.1| conserved hypothetical protein [Ricinus communis]
            gi|223542956|gb|EEF44492.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 786

 Score =  134 bits (338), Expect = 3e-29
 Identities = 69/121 (57%), Positives = 83/121 (68%)
 Frame = +2

Query: 821  GKKEKNEEDDTVDEKSDMEDGEIVLSDADEMVAWXXXXXXXXXXXXTRPITSKNELKALP 1000
            G   K++ED+  DEK+ +E  ++   D +E                  PI S+NELK LP
Sbjct: 336  GMVHKSDEDEEEDEKNMVEWSDVEFDDIEE--------EEEGTGLMKGPIRSQNELKFLP 387

Query: 1001 PVPSISVTLEPHHQTLPVGTVLSIVGAQVIVEGVEKHNPLNEGSILWITDSRSPLGIVDE 1180
            PVP + VTL+PHHQ LPVG VLSI+ AQVIVEGVEKHNPLNEGSILWIT+ RSPLG+VDE
Sbjct: 388  PVPPVDVTLQPHHQVLPVGVVLSIINAQVIVEGVEKHNPLNEGSILWITEKRSPLGLVDE 447

Query: 1181 I 1183
            I
Sbjct: 448  I 448


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